Salmonella enterica S5_VPH_Chula |
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Putative Salmonella enterica S5_VPH_Chula RM systems
Ref: Kiatyingangsulee,T. and Chuanchuen,R. unpublished
REBASE ref # 36628
| Sequence length: | GenBank #: | |
| Chromosome: | 4,825,593 bp | CP121410 |
| plasmid unnamed1: | 301,273 bp | CP121411 |
REBASE acronym: SenS5
Org_num: 66827
All begin QAT92_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2280 | DUF2556 family protein | |||
| 2285 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS5ORF2285P |
| 2290 | DNA-binding transcriptional regulator Fis | |||
| 4205 | toll/interleukin-1 receptor domain-containing | |||
| 4210 | R | SenS7VPHORF4215P (100% identity) | CCWGG | SenS5ORF4215P |
| 4215 | M | M.SenS7VPHORF4215P (100% identity) | CCWGG | M.SenS5ORF4215P |
| 4220 | transposase | |||
| 9400 | phosphohydrolase | |||
| 9405 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenS5DcmP |
| 9410 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS5DcmP |
| 9415 | drug/metabolite exporter YedA | |||
| 20065 | integrase | |||
| 20070 | R | SenXORF20240P (100% identity) | SenS5ORF20070P | |
| 20075 | sce7725 family protein | |||
| plasmid unnamed1 | ||||
| 23965 | thermonuclease family protein | |||
| 23970 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SenS5ORF23970P |
| 23975 | 55 aa hypothetical protein | |||
| 24655 | IS5 family transposase | |||
| 24660 | M | M.YpsF1ORFBP (100% identity) | M.SenS5ORF24660P | |
| 24665 | 202 aa hypothetical protein | |||
| 24790 | DNA-binding protein | |||
| 24795 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SenS5ORF24795P |
| 24800 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17775 | small effector SsaA | |||
| 17780 | R | SenS7VPHORF17780P (100% identity) | CAGAG | SenS5ORF17785P |
| 17785 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.SenS5ORF17785P |
| 17790 | MFS transporter | |||