Salmonella enterica S12_VPH_Chula |
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Putative Salmonella enterica S12_VPH_Chula RM systems
Ref: Kiatyingangsulee,T. and Chuanchuen,R. unpublished
REBASE ref # 36628
Complete sequence: 4,880,738 bp
GenBank #: CP121380
REBASE acronym: SenS12VPH
Org_num: 66825
All begin QAT96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11365 | Fic family protein | |||
| 11370 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | SenS12VPHORF11380P |
| 11375 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.SenS12VPHORF11380P |
| 11380 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.SenS12VPHORF11380P |
| 11385 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.SenS12VPHORF11380P |
| 11390 | toll/interleukin-1 receptor domain-containing | |||
| 19920 | 291 aa hypothetical protein | |||
| 19925 | M | M.SenS11ORF19925P (100% identity) | CCACNNNNNNCAT | M.SenS12VPHORF19925P |
| 19930 | S | S.SenS11ORF19925P (100% identity) | CCACNNNNNNCAT | S.SenS12VPHORF19925P |
| 19935 | endonuclease NucS | |||
| 19940 | R | SenS11ORF19925P (100% identity) | CCACNNNNNNCAT | SenS12VPHORF19925P |
| 19945 | 56 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5660 | drug/metabolite exporter YedA | |||
| 5665 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenS12VPHDcmP |
| 5670 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.SenS12VPHDcmP |
| 5675 | phosphohydrolase | |||
| 11350 | YebC/PmpR family DNA-binding transcriptional | |||
| 11355 | R | SenS11ORF11355P (100% identity) | SenS12VPHORF11355P | |
| 11360 | fosfomycin resistance glutathione transferase | |||
| 11440 | DUF87 domain-containing protein | |||
| 11445 | M | M.SenSA2ORF2906P (100% identity) | CAGCTG | M.SenS12VPHORF11445P |
| 11450 | 97 aa hypothetical protein | |||
| 16850 | cell division protein DamX | |||
| 16855 | M | M.StyTDamP (100% identity) | GATC | M.SenS12VPHDamP |
| 16860 | ribulose-phosphate 3-epimerase | |||
| 17345 | DUF2556 family protein | |||
| 17350 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenS12VPHORF17350P |
| 17355 | DNA-binding transcriptional regulator Fis | |||
| 20710 | TraR/DksA family transcriptional regulator | |||
| 20715 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.SenS12VPHORF20715P |
| 20720 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9130 | small effector SsaA | |||
| 9135 | R | SenS11ORF9140P (100% identity) | CAGAG | SenS12VPHORF9140P |
| 9140 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenS12VPHORF9140P |
| 9145 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11400 | 398 aa hypothetical protein | |||
| 11405 | R | SenS11MrrP (100% identity) | SenS12VPHMrrP | |
| 11410 | type II toxin-antitoxin system HipA family | |||