Salmonella enterica subsp. enterica KKP 998 |
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Putative Salmonella enterica subsp. enterica KKP 998 RM systems
Ref: Wojcicki,M. et al. unpublished
REBASE ref # 36629
Complete sequence: 4,578,586 bp
GenBank #: CP121295
REBASE acronym: Sen998
Org_num: 66837
All begin P1837_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20500 | winged helix-turn-helix domain-containing | |||
| 20505 | R | SenST278ORF22455P (100% identity) | GACNNNNNNNTGAC | Sen998ORF20510P |
| 20510 | M | M.Sen1762ORF2420P (100% identity) | GACNNNNNNNTGAC | M.Sen998ORF20510P |
| 20515 | S | S.SenST278ORF22455P (100% identity) | GACNNNNNNNTGAC | S.Sen998ORF20510P |
| 20520 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | DUF2556 family protein | |||
| 3555 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen998ORF3555P |
| 3560 | DNA-binding transcriptional regulator Fis | |||
| 9885 | phosphohydrolase | |||
| 9890 | M | M.SenST278DcmP (100% identity) | CCWGG | M.Sen998DcmP |
| 9895 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen998DcmP |
| 9900 | drug/metabolite exporter YedA | |||
| 13365 | 92 aa hypothetical protein | |||
| 13370 | M | M.Sen1213ORF19405P (100% identity) | M.Sen998ORF13370P | |
| 13375 | replication endonuclease | |||
| 20635 | YebC/PmpR family DNA-binding transcriptional | |||
| 20640 | R | Sens12373ORF19550P (100% identity) | Sen998ORF20640P | |
| 20645 | 64 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18485 | small effector SsaA | |||
| 18490 | R | SenSB699ORF9290P (100% identity) | CAGAG | Sen998ORF18495P |
| 18495 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen998ORF18495P |
| 18500 | MFS transporter | |||