Escherichia coli WF5-5-T1 |
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Putative Escherichia coli WF5-5-T1 RM systems
Ref: Liu,B.-T. unpublished
REBASE ref # 36548
| Sequence length: | GenBank #: | |
| Chromosome: | 4,574,891 bp | CP049110 |
| plasmid pMCR_NDM: | 436,531 bp | CP049111 |
REBASE acronym: EcoWF55T1
Org_num: 66558
All begin G5631_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18780 | Mrr restriction system protein | |||
| 18785 | R | EcoWF55T2ORF18815P (100% identity) | AACNNNNNNGTGC | EcoWF55T1ORF18790P |
| 18790 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoWF55T1ORF18790P |
| 18795 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoWF55T1ORF18790P |
| 18800 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2435 | DNA-binding transcriptional regulator Fis | |||
| 2440 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoWF55T1ORF2440P |
| 2445 | DUF2556 family protein | |||
| 3070 | ribulose-phosphate 3-epimerase | |||
| 3075 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoWF55T1DamP |
| 3080 | cell division protein DamX | |||
| 8780 | phosphohydrolase | |||
| 8785 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoWF55T1DcmP |
| 8790 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoWF55T1DcmP |
| 8795 | drug/metabolite exporter YedA | |||
| plasmid pMCR_NDM | ||||
| 23030 | 100 aa hypothetical protein | |||
| 23035 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.EcoWF55T1ORF23035P |
| 23040 | 143 aa hypothetical protein | |||
| 23790 | 284 aa hypothetical protein | |||
| 23795 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoWF55T1ORF23795P |
| 23800 | DNA-binding protein | |||
| 23910 | 202 aa hypothetical protein | |||
| 23915 | M | M.YpsF1ORFBP (100% identity) | M.EcoWF55T1ORF23915P | |
| 23920 | 48 aa hypothetical protein | |||
| 24510 | 55 aa hypothetical protein | |||
| 24515 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoWF55T1ORF24515P |
| 24520 | thermonuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18775 | GTPase | |||
| 18780 | R | SenHNK130MrrP (100% identity) | EcoWF55T1MrrP | |
| 18785 | type I restriction-modification system | |||