Citrobacter braakii P1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter braakii P1 RM systems
Ref: Yu,M. et al. unpublished
REBASE ref # 36520
Complete sequence: 5,081,794 bp
GenBank #: CP092860
REBASE acronym: CbrP1
Org_num: 66264
All begin MJ613_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3200 | RNA-directed DNA polymerase | |||
| 3205 | M | M.CfrCitBORF3140P (100% identity) | ACCNNNNNNGTCA | M.CbrP1ORF3205P |
| 3210 | S | S.Cpo1I (100% identity) | ACCNNNNNNGTCA | S.CbrP1ORF3205P |
| 3215 | R | Cpo1IP (100% identity) | ACCNNNNNNGTCA | CbrP1ORF3205P |
| 3220 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.Csp696ORF2260P (100% identity) | ATGCAT | M.CbrP1ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5725 | conserved phage C-terminal domain-containing | |||
| 5730 | M | M.Cfr8165ORF1577P (97% identity) | M.CbrP1ORF5730P | |
| 5735 | RusA family crossover junction | |||
| 5990 | 231 aa hypothetical protein | |||
| 5995 | M | M.Sen628ORF3525P (97% identity) | M.CbrP1ORF5995P | |
| 6000 | replication endonuclease | |||
| 9670 | phosphohydrolase | |||
| 9675 | M | M.CspC18ORF8990P (99% identity) | CCWGG | M.CbrP1ORF9675P |
| 9680 | V | V.Csp696ORF10355P (100% identity) | V.CbrP1ORF9675P | |
| 9685 | drug/metabolite exporter YedA | |||
| 9950 | 3-5 exoribonuclease | |||
| 9955 | M | M.Ero695ORF8615P (99% identity) | M.CbrP1ORF9955P | |
| 9960 | 68 aa hypothetical protein | |||
| 9965 | 57 aa hypothetical protein | |||
| 9970 | M | M1.Eco04AORF23120P (95% identity) | M.CbrP1ORF9970P | |
| 9975 | replication endonuclease | |||
| 9975 | replication endonuclease | |||
| 9980 | M | M.Eco15ORF23668P (94% identity) | M.CbrP1ORF9980P | |
| 9985 | 97 aa hypothetical protein | |||
| 10825 | DUF5405 family protein | |||
| 10830 | M | M.Cpo4hyORF9005P (95% identity) | M.CbrP1ORF10830P | |
| 10835 | 153 aa hypothetical protein | |||
| 14460 | 152 aa hypothetical protein | |||
| 14465 | M | M.EclXA1ORFDP (96% identity) | M.CbrP1ORF14465P | |
| 14470 | 130 aa hypothetical protein | |||
| 21840 | 149 aa hypothetical protein | |||
| 21845 | R | CbrSOC04ORF3030P (99% identity) | CbrP1ORF21845P | |
| 21850 | toprim domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3215 | DEAD/DEAH box helicase family protein | |||
| 3220 | R | CfrCitBMcrBP (100% identity) | CbrP1McrBP | |
| 3225 | R | Cpo1McrCP (99% identity) | CbrP1McrCP | |
| 3230 | transcriptional regulator | |||