|
Putative Escherichia coli E14 RM systems
Ref: Zhu,Q. et al. unpublished
REBASE ref # 36398
Sequence length: | GenBank #: | |
Chromosome: | 4,988,967 bp | CP121149 |
plasmid pE14-1: | 226,260 bp | CP121150 |
REBASE acronym: EcoE14
Org_num: 66412
All begin P1I99_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
345 | helix-turn-helix domain-containing protein | |||
350 | R | Vsp1111ORF14985P (100% identity) | EcoE14ORF355P | |
355 | M | M.VvuYORF266P (99% identity) | M.EcoE14ORF355P | |
360 | S | S.Vfl942ORF10P (100% identity) | S.EcoE14ORF355P | |
365 | 265 aa hypothetical protein | |||
3975 | extracellular solute-binding protein | |||
3980 | M | M.SflN101ORF19075P (94% identity) | GAACNNNNNTGC | M.EcoE14ORF3980P |
3985 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoE14ORF3980P |
3990 | transposase domain-containing protein | |||
20545 | 322 aa hypothetical protein | |||
20550 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoE14ORF20555P |
20555 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoE14ORF20555P |
20560 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoE14ORF20555P |
20565 | endoribonuclease SymE | |||
20775 | 128 aa hypothetical protein | |||
20780 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.EcoE14ORF20780P |
20785 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoE14ORF20780P |
20790 | 428 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1770 | cell division protein DamX | |||
1775 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE14DamP |
1780 | ribulose-phosphate 3-epimerase | |||
2300 | DUF2556 family protein | |||
2305 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE14ORF2305P |
2310 | DNA-binding transcriptional regulator Fis | |||
5965 | PerC family transcriptional regulator | |||
5970 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoE14ORF5970P |
5975 | LexA family transcriptional regulator | |||
9955 | phosphohydrolase | |||
9960 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoE14DcmP |
9965 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoE14DcmP |
9970 | drug/metabolite exporter YedA | |||
20755 | HNH endonuclease | |||
20760 | R | SflN101ORF11875P (100% identity) | EcoE14ORF20760P | |
20765 | AAA family ATPase | |||
plasmid pE14-1 | ||||
24375 | thermonuclease family protein | |||
24380 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoE14ORF24380P |
24385 | 55 aa hypothetical protein | |||
25035 | 284 aa hypothetical protein | |||
25040 | M | M.YpsF1ORFDP (95% identity) | M.EcoE14ORF25040P | |
25045 | DNA-binding protein | |||
25150 | 202 aa hypothetical protein | |||
25155 | M | M.YpsF1ORFBP (100% identity) | M.EcoE14ORF25155P | |
25160 | 48 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20565 | endoribonuclease SymE | |||
20570 | R | Ecos673GmrDP (100% identity) | EcoE14GmrDP | |
20575 | R | SflN101GmrSP (100% identity) | EcoE14GmrSP | |
20580 | cytoplasmic protein | |||
20760 | HNH endonuclease | |||
20765 | R | SflN101McrBP (100% identity) | EcoE14McrBP | |
20770 | R | SflN101McrCP (100% identity) | EcoE14McrCP | |
20775 | 128 aa hypothetical protein |