Salmonella enterica subsp. enterica serovar Indiana S1467 |
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Putative Salmonella enterica subsp. enterica serovar Indiana S1467 RM systems
Ref: Gong,J. unpublished
REBASE ref # 36631
Complete sequence: 4,998,300 bp
GenBank #: CP121189
REBASE acronym: Sen1467
Org_num: 66839
All begin P6164_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4130 | transposase | |||
| 4135 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Sen1467ORF4140P |
| 4140 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen1467ORF4140P |
| 4145 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen1467ORF4140P |
| 4150 | AAA family ATPase | |||
| 14770 | GTPase family protein | |||
| 14775 | M | M.EcoF138ORF26590P (100% identity) | CACNNNNNNTCC | M.Sen1467ORF14775P |
| 14780 | S | S.EcoW25II (100% identity) | CACNNNNNNTCC | S.Sen1467ORF14775P |
| 14785 | R | EcoB202ORF14705P (100% identity) | CACNNNNNNTCC | Sen1467ORF14775P |
| 14790 | IS5-like element ISKpn26 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.Sensp14178ORF2230P (100% identity) | ATGCAT | M.Sen1467ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 3270 | DEAD/DEAH box helicase | |||
| 3275 | RM | SflLIN17ORF3140P (100% identity) | Sen1467ORF3275P | |
| 3280 | transposase | |||
| 10075 | phosphohydrolase | |||
| 10080 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen1467DcmP |
| 10085 | V | V.Sensp14178DcmP (100% identity) | CCWGG | V.Sen1467DcmP |
| 10090 | drug/metabolite exporter YedA | |||
| 20835 | YebC/PmpR family DNA-binding transcriptional | |||
| 20840 | R | Sensp14178ORF19855P (100% identity) | Sen1467ORF20840P | |
| 20845 | DUF2220 family protein | |||
| 20880 | sigma factor-like helix-turn-helix DNA-binding | |||
| 20885 | R | SenV2ORF20065P (100% identity) | Sen1467ORF20885P | |
| 20890 | malate transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18220 | small effector SsaA | |||
| 18225 | R | Sensp14154ORF17330P (100% identity) | CAGAG | Sen1467ORF18235P |
| 18230 | IS1-like element IS1B family transposase | |||
| 18235 | M | M.Sensp14152ORF17835P (100% identity) | CAGAG | M.Sen1467ORF18235P |
| 18240 | MFS transporter | |||
| 20920 | S8 family peptidase | |||
| 20925 | M | M.Sensp14178ORF19930P (100% identity) | CGGAAC | M.Sen1467ORF20925P |
| 20930 | R | Sensp14178ORF19930P (100% identity) | CGGAAC | Sen1467ORF20925P |
| 20935 | integrase arm-type DNA-binding domain-containing | |||