Escherichia coli ST3 |
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Putative Escherichia coli ST3 RM systems
Ref: Gaibani,P. and Amadesi,S. unpublished
REBASE ref # 34044
| Sequence length: | GenBank #: | |
| Chromosome: | 4,969,640 bp | CP121087 |
| plasmid p167kb: | 167,740 bp | CP121088 |
REBASE acronym: EcoST3
Org_num: 66550
All begin P5670_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11935 | adenine/cytosine-specific restriction | |||
| 11940 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | EcoST3ORF11945P |
| 11945 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoST3ORF11945P |
| 11950 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoST3ORF11945P |
| 11955 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 800 | phosphohydrolase | |||
| 805 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.EcoST3DcmP |
| 810 | V | V.Ecostr9DcmP (73% identity) | V.EcoST3DcmP | |
| 815 | drug/metabolite exporter YedA | |||
| 5070 | NinE family protein | |||
| 5075 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoST3ORF5075P |
| 5080 | recombination protein NinB | |||
| 8620 | LexA family transcriptional regulator | |||
| 8625 | M | M.EcoTO6ORF3546P (100% identity) | GATC | M.EcoST3ORF8625P |
| 8630 | PerC family transcriptional regulator | |||
| 17310 | cell division protein DamX | |||
| 17315 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoST3DamP |
| 17320 | ribulose-phosphate 3-epimerase | |||
| plasmid p167kb | ||||
| 24680 | 73 aa hypothetical protein | |||
| 24685 | M | M.SflN92ORF24820P (100% identity) | M.EcoST3ORF24685P | |
| 24690 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11930 | GTPase | |||
| 11935 | R | SenHNK130MrrP (100% identity) | EcoST3MrrP | |
| 11940 | type I restriction-modification system | |||
| 11955 | endoribonuclease SymE | |||
| 11960 | R | SenHNK130McrBP (99% identity) | EcoST3McrBP | |
| 11965 | R | SenHNK130McrCP (100% identity) | EcoST3McrCP | |