Spiroplasma citri D12 |
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Putative Spiroplasma citri D12 RM systems
Ref: Khanchezar,A. et al. unpublished
REBASE ref # 36636
Complete sequence: 1,599,606 bp
GenBank #: CP096808
REBASE acronym: SciD12
Org_num: 66861
All begin M1771_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 425 | type IV secretory system conjugative DNA | |||
| 430 | R | SciD4ORF425P (100% identity) | SciD12ORF435P | |
| 435 | M | M.SciD4ORF425P (99% identity) | M.SciD12ORF435P | |
| 440 | S | S.SciD4ORF425P (99% identity) | S.SciD12ORF435P | |
| 445 | UPF0236 family protein | |||
| 4695 | 59 aa hypothetical protein | |||
| 4700 | S | S.SciR8ORF908P (97% identity) | S.SciD12ORF4705P | |
| 4705 | M | M.SciD4ORF4720P (99% identity) | M.SciD12ORF4705P | |
| ??? | R | SciD4ORF4720P (100% identity) | SciD12ORF4705P | |
| 4710 | 173 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3150 | 63 aa hypothetical protein | |||
| 3155 | M | M.SciD4ORF3160P (99% identity) | M.SciD12ORF3155P | |
| 3160 | 166 aa hypothetical protein | |||
| 3225 | DUF3627 domain-containing protein | |||
| 3230 | M | M.SciD4ORF3245P (99% identity) | M.SciD12ORF3230P | |
| 3235 | 75 aa hypothetical protein | |||
| 4205 | 150 aa hypothetical protein | |||
| ??? | M | M.SciD4ORF4225P (100% identity) | M.SciD12ORF4210P | |
| 4220 | 84 aa hypothetical protein | |||
| 4260 | DUF3627 domain-containing protein | |||
| 4265 | M | M.SciD4ORF4280P (99% identity) | M.SciD12ORF4265P | |
| 4270 | 77 aa hypothetical protein | |||
| 5710 | phosphatase PAP2 family protein | |||
| ??? | M | M.SciD4ORF5750P (90% identity) | M.SciD12ORF5715P | |
| 5730 | 102 aa hypothetical protein | |||
| 6185 | 77 aa hypothetical protein | |||
| 6190 | M | M1.SciD4ORF6240P (93% identity) | M1.SciD12ORF6190P | |
| 6195 | DUF3627 domain-containing protein | |||
| 6200 | 54 aa hypothetical protein | |||
| 6205 | 81 aa hypothetical protein | |||
| 6210 | NAD(P)H-hydrate dehydratase | |||
| 6215 | 121 aa hypothetical protein | |||
| 6220 | 81 aa hypothetical protein | |||
| 6225 | 54 aa hypothetical protein | |||
| 6230 | DUF3627 domain-containing protein | |||
| 6235 | M | M2.SciD4ORF6240P (100% identity) | M2.SciD12ORF6190P | |
| 6240 | 77 aa hypothetical protein | |||
| 6325 | 59 aa hypothetical protein | |||
| 6330 | RM | SciD4ORF6380P (100% identity) | SciD12ORF6330P | |
| 6335 | 167 aa hypothetical protein | |||
| 8455 | DUF3627 domain-containing protein | |||
| 8460 | M | M1.SciD12ORF6190P (91% identity) | M.SciD12ORF8460P | |
| 8465 | 77 aa hypothetical protein | |||