Spiroplasma citri D4 |
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Putative Spiroplasma citri D4 RM systems
Ref: Khanchezar,A. et al. unpublished
REBASE ref # 36636
Complete sequence: 1,599,591 bp
GenBank #: CP096246
REBASE acronym: SciD4
Org_num: 66862
All begin M0C40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 415 | type IV secretory system conjugative DNA | |||
| 420 | R | SciD12ORF435P (100% identity) | SciD4ORF425P | |
| 425 | M | M.SciD12ORF435P (99% identity) | M.SciD4ORF425P | |
| 430 | S | S.SciD12ORF435P (99% identity) | S.SciD4ORF425P | |
| 435 | UPF0236 family protein | |||
| 4710 | 59 aa hypothetical protein | |||
| 4715 | S | S.SciR8ORF908P (97% identity) | S.SciD4ORF4720P | |
| 4720 | M | M.SciD12ORF4705P (99% identity) | M.SciD4ORF4720P | |
| ??? | R | SciD12ORF4705P (100% identity) | SciD4ORF4720P | |
| 4725 | 45 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3155 | 63 aa hypothetical protein | |||
| 3160 | M | M.SciD12ORF3155P (99% identity) | M.SciD4ORF3160P | |
| 3165 | 49 aa hypothetical protein | |||
| 3240 | DUF3627 domain-containing protein | |||
| 3245 | M | M.SciD10ORF3180P (99% identity) | M.SciD4ORF3245P | |
| 3250 | 64 aa hypothetical protein | |||
| 3570 | 63 aa hypothetical protein | |||
| 3575 | M | M.SciD4ORF890P (94% identity) | M.SciD4ORF3575P | |
| 3580 | DUF3627 domain-containing protein | |||
| 3930 | 77 aa hypothetical protein | |||
| ??? | M | M.SciD10ORF3880AP (65% identity) | M.SciD4ORFAP | |
| 3940 | DUF3627 domain-containing protein | |||
| 4220 | 150 aa hypothetical protein | |||
| ??? | M | M.SciD12ORF4210P (100% identity) | M.SciD4ORF4225P | |
| 4235 | 84 aa hypothetical protein | |||
| 4275 | DUF3627 domain-containing protein | |||
| 4280 | M | M.SciD12ORF4265P (99% identity) | M.SciD4ORF4280P | |
| 4285 | 77 aa hypothetical protein | |||
| 5745 | phosphatase PAP2 family protein | |||
| ??? | M | M.SciD12ORF5715P (90% identity) | M.SciD4ORF5750P | |
| 5765 | 102 aa hypothetical protein | |||
| 6235 | 77 aa hypothetical protein | |||
| 6240 | M | M1.SciD12ORF6190P (93% identity) | M1.SciD4ORF6240P | |
| 6245 | DUF3627 domain-containing protein | |||
| 6250 | 54 aa hypothetical protein | |||
| 6255 | 81 aa hypothetical protein | |||
| 6260 | NAD(P)H-hydrate dehydratase | |||
| 6265 | 121 aa hypothetical protein | |||
| 6270 | 81 aa hypothetical protein | |||
| 6275 | 54 aa hypothetical protein | |||
| 6280 | DUF3627 domain-containing protein | |||
| 6285 | M | M2.SciD12ORF6190P (100% identity) | M2.SciD4ORF6240P | |
| 6290 | 77 aa hypothetical protein | |||
| 6375 | 59 aa hypothetical protein | |||
| 6380 | RM | SciD12ORF6330P (100% identity) | SciD4ORF6380P | |
| 6385 | 167 aa hypothetical protein | |||
| 8520 | DUF3627 domain-containing protein | |||
| 8525 | M | M1.SciD12ORF6190P (95% identity) | M.SciD4ORF8525P | |
| 8530 | 77 aa hypothetical protein | |||