Streptococcus suis Transconjugant cSFJ45 |
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Putative Streptococcus suis Transconjugant cSFJ45 RM systems
Ref: Dai,X. et al. unpublished
REBASE ref # 36652
Complete sequence: 2,091,110 bp
GenBank #: CP102748
REBASE acronym: Ssu45
Org_num: 66954
All begin NWE21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3840 | FAD-containing oxidoreductase | |||
| 3845 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | Ssu45ORF3850P |
| 3850 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.Ssu45ORF3850P |
| 3855 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.Ssu45ORF3850P |
| 3860 | 310 aa hypothetical protein | |||
| 6860 | ribose-5-phosphate isomerase RpiA | |||
| 6865 | S | S2.SsucSS389ORF6590P (100% identity) | S2.Ssu45ORF6875P | |
| 6870 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.Ssu45ORF6875P |
| 6875 | M | M.SsuiS10ORFBP (100% identity) | M.Ssu45ORF6875P | |
| 6880 | R | SsuiS10ORFBP (100% identity) | Ssu45ORF6875P | |
| 6885 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 8430 | serine--tRNA ligase | |||
| 8435 | M | M.SsuiS10ORFAP (100% identity) | M.Ssu45ORF8435P | |
| 8440 | S | S.SsuiS10ORFAP (100% identity) | S.Ssu45ORF8435P | |
| 8445 | R | SsuiS10ORFAP (100% identity) | Ssu45ORF8435P | |
| 8450 | restriction endonuclease subunit S | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | IS3 family transposase | |||
| 2065 | M | M1.Ssu45ORF1815P (92% identity) | M1.Ssu45ORF2065P | |
| 2070 | M | M2.Ssu45ORF1815P (69% identity) | M2.Ssu45ORF2065P | |
| 2075 | 62 aa hypothetical protein | |||
| 2080 | R | Ssu45ORF1815P (71% identity) | Ssu45ORF2065AP | |
| 2085 | R | Ssu45ORF1815P (23% identity) | Ssu45ORF2065BP | |
| 2090 | 50 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3790 | DUF3885 domain-containing protein | |||
| ??? | M | M.Ssu38828ORF3335P (96% identity) | M.Ssu45ORFAP | |
| 3800 | R | SsuiS10ORFEP (100% identity) | Ssu45ORFAP | |
| 3805 | IS200/IS605 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4575 | 262 aa hypothetical protein | |||
| 4580 | R | SsuiS10McrBP (100% identity) | Ssu45McrBP | |
| 4585 | R | SsucSS389McrCP (100% identity) | Ssu45McrCP | |
| 4590 | site-specific integrase | |||