Streptococcus parasuis SFJ45 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Streptococcus parasuis SFJ45 RM systems
Ref: Dai,X. et al. unpublished
REBASE ref # 36652
Complete sequence: 2,015,398 bp
GenBank #: CP102747
REBASE acronym: SpaSFJ45
Org_num: 66947
All begin NWE22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4560 | formate--tetrahydrofolate ligase | |||
| 4565 | R | SpaH35ORF1915P (100% identity) | SpaSFJ45ORF4570P | |
| 4570 | M | M.SpaSS20ORF4430P (98% identity) | M.SpaSFJ45ORF4570P | |
| 4575 | S | S.SpaSS20ORF4430P (58% identity) | S.SpaSFJ45ORF4570P | |
| 4580 | DUF6261 family protein | |||
| 7820 | 253 aa hypothetical protein | |||
| 7825 | S | S2.PmeBin152ORFBP (21% identity) | S3.SpaSFJ45ORF7850P | |
| 7830 | site-specific integrase | |||
| 7835 | S | S.LlaLD61ORF1645P (68% identity) | S2.SpaSFJ45ORF7850P | |
| 7840 | R | SsuSFJ44ORF7850P (96% identity) | SpaSFJ45ORF7850P | |
| 7845 | S | S1.SsuF001ORF12060P (62% identity) | S1.SpaSFJ45ORF7850P | |
| 7850 | M | M.SsuSFJ44ORF7850P (99% identity) | M.SpaSFJ45ORF7850P | |
| 7855 | DUF6261 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1945 | IS3 family transposase | |||
| 1950 | M | M1.Ssu45ORF1815P (100% identity) | M1.SpaSFJ45ORF1950P | |
| 1955 | M | M2.Ssu45ORF1815P (100% identity) | M2.SpaSFJ45ORF1950P | |
| 1960 | R | Ssu45ORF1815P (100% identity) | SpaSFJ45ORF1950P | |
| 1965 | 50 aa hypothetical protein | |||
| 8635 | DNA-binding protein | |||
| 8640 | RM | SsuSFJ44ORF8660P (100% identity) | SpaSFJ45ORF8645P | |
| 8645 | M | M.SsuSFJ44ORF8660P (100% identity) | M.SpaSFJ45ORF8645P | |
| 8650 | tyrosine-type recombinase/integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3785 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| 3790 | M | M.Seq11436I (83% identity) | M.SpaSFJ45ORF3790P | |
| 3795 | R | Ssu2ORF4230P (93% identity) | SpaSFJ45ORF3790P | |
| 3800 | 679 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8230 | (deoxy)nucleoside triphosphate | |||
| 8235 | R | SpaSS20ORF7880P (98% identity) | SpaSFJ45ORF8235P | |
| 8240 | RNA-directed DNA polymerase | |||