Weissella confusa CYLB30 |
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Putative Weissella confusa CYLB30 RM systems
Ref: Tran,T.D. unpublished
REBASE ref # 36465
| Sequence length: | GenBank #: | |
| Chromosome: | 2,410,204 bp | CP120516 |
| plasmid pCYLB30-4: | 13,579 bp | CP120519 |
| plasmid pCYLB30-5: | 12,851 bp | CP120514 |
REBASE acronym: Wco830
Org_num: 66089
All begin P3T51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7950 | DNA-processing protein DprA | |||
| 7955 | M | M.Lsa65ORF10435P (96% identity) | M.Wco830ORF7955P | |
| 7960 | S | S3.WjoFOL01ORF1560P (91% identity) | S1.Wco830ORF7955P | |
| 7965 | S | S3.Wco830ORF7955P (58% identity) | S2.Wco830ORF7955P | |
| 7970 | tyrosine-type recombinase/integrase | |||
| 7975 | S | S2.Wco830ORF7955P (58% identity) | S3.Wco830ORF7955P | |
| 7980 | R | Lsa22ORF4380P (95% identity) | Wco830ORF7955P | |
| 7985 | 363 aa hypothetical protein | |||
| plasmid pCYLB30-4 | ||||
| 12205 | DNA-binding protein | |||
| 12150 | M | M.WciJW15ORF12180P (97% identity) | M.Wco830ORF12150P | |
| 12155 | S | S.Lcu8ORF10135P (58% identity) | S.Wco830ORF12150P | |
| 12145 | R | Wco830ORF10P (98% identity) | Wco830ORF12150P | |
| plasmid pCYLB30-5 | ||||
| 50 | DNA-binding protein | |||
| 10 | M | M.Lba2002III (97% identity) | M.Wco830ORF10P | |
| 15 | S | S.Lme10817I (59% identity) | S.Wco830ORF10P | |
| 5 | R | Wco830ORF12150P (98% identity) | Wco830ORF10P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2010 | TaqI-like C-terminal specificity | |||
| 2015 | RM | Wco392ORFDP (48% identity) | Wco830ORF2015P | |
| 2020 | 201 aa hypothetical protein | |||
| 3075 | 84 aa hypothetical protein | |||
| 3080 | M | M.WcoN17ORF4105P (95% identity) | M.Wco830ORF3080P | |
| 3085 | YopX family protein | |||
| 9410 | 348 aa hypothetical protein | |||
| 9415 | R | Wpa414DptFP (53% identity) | Wco830DptFP | |
| 9420 | DNA phosphorothioation-dependent restriction | |||
| 9415 | DNA phosphorothioation-dependent restriction | |||
| 9420 | R | Wpa414DptGP (44% identity) | Wco830DptGP | |
| 9425 | 284 aa hypothetical protein | |||
| 9425 | 284 aa hypothetical protein | |||
| 9430 | R | Wpa414DptHP (47% identity) | Wco830DptHP | |
| 9435 | 113 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5810 | DDE-type integrase/transposase/recombinase | |||
| 5815 | R | Edu8130IIIP (97% identity) | Wco830ORF5820P | |
| 5820 | M | M1.Efa2148ORFCP (97% identity) | M1.Wco830ORF5820P | |
| 5825 | 215 aa hypothetical protein | |||
| 5830 | 74 aa hypothetical protein | |||
| 5835 | 110 aa hypothetical protein | |||
| 5840 | M | M1.PpeWK1ORFCP (90% identity) | GCCAT | M2.Wco830ORF5820P |
| 5845 | DUF4391 domain-containing protein | |||
| 5850 | helicase-related protein | |||
| 5855 | helix-turn-helix transcriptional regulator | |||
| 5860 | M | M.LfeHFD1ORF1379P (28% identity) | M3.Wco830ORF5820P | |
| 5865 | 131 aa hypothetical protein | |||