Clostridium perfringens D FU17 |
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Putative Clostridium perfringens D FU17 RM systems
Ref: Ma,Y. et al. J Clin Invest (2023) In press
REBASE ref # 36450
| Sequence length: | GenBank #: | |
| Chromosome: | 3,384,597 bp | CP116432 |
| plasmid pFU17etx: | 54,590 bp | CP116433 |
REBASE acronym: CpeFU17
Org_num: 66049
All begin PL325_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 980 | recombinase family protein | |||
| 985 | M | M.BspBB3R1ORF22065P (54% identity) | M.CpeFU17ORF985P | |
| 990 | R | Mfo14469aORF7995P (40% identity) | CpeFU17ORF985P | |
| 995 | 112 aa hypothetical protein | |||
| 15420 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| ??? | M | M.CpeBNCPORF14660P (97% identity) | M.CpeFU17ORF15425P | |
| 15435 | YhgE/Pip domain-containing protein | |||
| 15565 | 377 aa hypothetical protein | |||
| 15570 | M | M1.Cpe83ORF2150P (100% identity) | M1.CpeFU17ORF15570P | |
| 15575 | M | M2.Cpe83ORF2150P (100% identity) | M2.CpeFU17ORF15570P | |
| 15580 | 137 aa hypothetical protein | |||
| 15660 | 104 aa hypothetical protein | |||
| 15665 | R | Cpe05ORF7045P (85% identity) | R2.CpeFU17ORF15685P | |
| 15670 | R | R1.CboZJK9ORF6755P (57% identity) | R1.CpeFU17ORF15685P | |
| 15675 | 243 aa hypothetical protein | |||
| 15680 | M | M2.CboZJK9ORF6755P (91% identity) | M2.CpeFU17ORF15685P | |
| 15685 | M | M1.CboZJK9ORF6755P (94% identity) | M1.CpeFU17ORF15685P | |
| 15690 | tyrosine-type recombinase/integrase | |||
| plasmid pFU17etx | ||||
| 16135 | 101 aa hypothetical protein | |||
| 16140 | M | M.Cpe8503ORF3376P (100% identity) | M.CpeFU17ORF16140P | |
| 16145 | 57 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5245 | 103 aa hypothetical protein | |||
| 5250 | R | Cpe931McrBP (97% identity) | CpeFU17McrBP | |
| 5255 | R | Cpe2aMcrC2P (96% identity) | CpeFU17McrCP | |
| 5260 | SdpI family protein | |||
| 5365 | ribosomal protein L7/L12 | |||
| 5370 | R | Cpe8503ORF220P (87% identity) | CpeFU17ORF5370P | |
| 5375 | DUF3427 domain-containing protein | |||
| 15495 | 107 aa hypothetical protein | |||
| 15500 | R | Cpe11MrrP (100% identity) | CpeFU17MrrP | |
| 15505 | recombinase family protein | |||