Clostridium perfringens B NCTC3110 |
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Putative Clostridium perfringens B NCTC3110 RM systems
Ref: Ma,Y. et al. J Clin Invest (2023) In press
REBASE ref # 36450
| Sequence length: | GenBank #: | |
| Chromosome: | 3,429,403 bp | CP116436 |
| plasmid pNCTC3110etx: | 64,721 bp | CP116437 |
REBASE acronym: Cpe3110
Org_num: 66046
All begin PL324_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5640 | P-loop NTPase fold protein | |||
| 5645 | R | Cpe3626ORF5380P (100% identity) | Cpe3110ORF5650P | |
| 5650 | M | M.Cpe3626ORF5380P (100% identity) | M.Cpe3110ORF5650P | |
| 5655 | S | S.Cpe3626ORF5380P (100% identity) | S.Cpe3110ORF5650P | |
| 5660 | 793 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 875 | 49 aa hypothetical protein | |||
| 880 | RM | CpeNE18ORF12755P (99% identity) | Cpe3110ORF880P | |
| 885 | S | S.CpeNE18ORF12755P (99% identity) | S.Cpe3110ORF880P | |
| 890 | ParB/RepB/Spo0J family partition protein | |||
| 15330 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 15335 | M | M.CpeN11ORF460P (100% identity) | GTATAC | M.Cpe3110ORF15335P |
| 15340 | YhgE/Pip domain-containing protein | |||
| plasmid pNCTC3110etx | ||||
| 15840 | 101 aa hypothetical protein | |||
| 15845 | M | M.Cpe8533ORFAP (93% identity) | M.Cpe3110ORF15845P | |
| 15850 | DUF4417 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5495 | 108 aa hypothetical protein | |||
| 5500 | R | Cpe83McrBP (100% identity) | Cpe3110McrBP | |
| 5505 | R | CpeDel1McrCP (100% identity) | Cpe3110McrCP | |
| 5510 | SdpI family protein | |||