Escherichia coli SME173 |
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Putative Escherichia coli SME173 RM systems
Ref: Sato,T. et al. unpublished
REBASE ref # 36396
| Sequence length: | GenBank #: | |
| Chromosome: | 4,926,296 bp | AP027450 |
| plasmid pSME173_1: | 94,528 bp | AP027449 |
REBASE acronym: EcoSME173
Org_num: 65804
All begin MUTS16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19330 | endoribonuclease SymE | |||
| ??? | R | Ecou021ORF19870P (100% identity) | EcoSME173ORF19400P | |
| 19380 | S | S2.Ecos119ORF20545P (100% identity) | S2.EcoSME173ORF19400P | |
| 19390 | S | S.Ecoppa3ORF11440P (49% identity) | S1.EcoSME173ORF19400P | |
| ??? | M | M.Ecou021ORF19870P (89% identity) | M.EcoSME173ORF19400P | |
| 19420 | 114 aa hypothetical protein | |||
| 24840 | 52 aa hypothetical protein | |||
| ??? | S | S.Ecos131ORF6575P (26% identity) | S3.EcoSME173ORF24870P | |
| 24850 | S | S.EcoBone8ORF19520P (50% identity) | S2.EcoSME173ORF24870P | |
| 24860 | S | S.Ecos131ORF6575P (17% identity) | S1.EcoSME173ORF24870P | |
| 24870 | M | M.EcosS9ORF4930P (100% identity) | M.EcoSME173ORF24870P | |
| ??? | R | EcosS9ORF4930P (96% identity) | EcoSME173ORF24870P | |
| 24930 | 203 aa hypothetical protein | |||
| plasmid pSME173_1 | ||||
| 520 | 88 aa hypothetical protein | |||
| ??? | M | M.SenceORFJP (99% identity) | M.EcoSME173ORF530P | |
| 560 | S | S.SenBR076ORFFP (46% identity) | S1.EcoSME173ORF530P | |
| 570 | S | S.SenBR076ORFFP (19% identity) | S2.EcoSME173ORF530P | |
| 580 | S | S3.EcoSME98ORF75420P (100% identity) | S3.EcoSME173ORF530P | |
| ??? | R | EcoBE25ORFDP (93% identity) | EcoSME173ORF530P | |
| 650 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2880 | phosphoglycolate phosphatase | |||
| ??? | M | M.EcoBone7DamP (36% identity) | M.EcoSME173DamP | |
| 2910 | 87 aa hypothetical protein | |||
| 18280 | 60 aa hypothetical protein | |||
| ??? | M | M.EcoSME98ORF8080P (98% identity) | M.EcoSME173ORF18290P | |
| 18330 | R | EcosEC21ORF19520P (69% identity) | EcoSME173ORF18290P | |
| 18340 | 331 aa hypothetical protein | |||
| 35230 | 71 aa hypothetical protein | |||
| 35240 | M | M.KpnYN1ORFGP (89% identity) | M.EcoSME173ORF35240P | |
| 35250 | 118 aa hypothetical protein | |||
| 41650 | 65 aa hypothetical protein | |||
| 41660 | M | M.EcoSME98ORF31460P (100% identity) | M.EcoSME173ORF41660P | |
| 41670 | 39 aa hypothetical protein | |||
| 52110 | 203 aa hypothetical protein | |||
| 52120 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoSME173DcmP |
| ??? | M | M.EcoBone4DcmP (100% identity) | CCWGG | M.EcoSME173DcmP |
| 52160 | 76 aa hypothetical protein | |||
| 74880 | 50 aa hypothetical protein | |||
| ??? | M | M.EcoSCU390ORF3240P (98% identity) | ATGCAT | M.EcoSME173ORF74890P |
| 74910 | 157 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18330 | 401 aa hypothetical protein | |||
| 18340 | R | EcosEC4McrCP (77% identity) | EcoSME173McrCP | |
| 18350 | 95 aa hypothetical protein | |||
| 18360 | 103 aa hypothetical protein | |||
| 18370 | 107 aa hypothetical protein | |||
| 18380 | transposase | |||
| 18390 | 93 aa hypothetical protein | |||
| 18400 | R | EcoSME98McrBP (71% identity) | EcoSME173McrBP | |
| 18410 | 47 aa hypothetical protein | |||