Escherichia coli E32 |
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Putative Escherichia coli E32 RM systems
Ref: Zhu,Q. et al. unpublished
REBASE ref # 36398
Complete sequence: 4,989,742 bp
GenBank #: CP119730
REBASE acronym: EcoE32
Org_num: 65876
All begin P1J21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3975 | extracellular solute-binding protein | |||
| 3980 | M | M.SflN101ORF19075P (94% identity) | GAACNNNNNTGC | M.EcoE32ORF3980P |
| 3985 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.EcoE32ORF3980P |
| 3990 | transposase domain-containing protein | |||
| 20545 | 322 aa hypothetical protein | |||
| 20550 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoE32ORF20555P |
| 20555 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoE32ORF20555P |
| 20560 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoE32ORF20555P |
| 20565 | endoribonuclease SymE | |||
| 20775 | 128 aa hypothetical protein | |||
| 20780 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.EcoE32ORF20780P |
| 20785 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.EcoE32ORF20780P |
| 20790 | 428 aa hypothetical protein | |||
| 21625 | AAA family ATPase | |||
| 21630 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoE32ORF21635P |
| 21635 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoE32ORF21635P |
| 21640 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoE32ORF21635P |
| 21645 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE32DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE32ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 5965 | PerC family transcriptional regulator | |||
| 5970 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoE32ORF5970P |
| 5975 | LexA family transcriptional regulator | |||
| 9950 | phosphohydrolase | |||
| 9955 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoE32DcmP |
| 9960 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoE32DcmP |
| 9965 | drug/metabolite exporter YedA | |||