Komagataeibacter nataicola DS12 |
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Putative Komagataeibacter nataicola DS12 RM systems
Ref: Keating,K.W. et al. unpublished
REBASE ref # 36409
| Sequence length: | GenBank #: | |
| Chromosome: | 3,452,065 bp | CP118675 |
| plasmid pKNA09: | 38,109 bp | CP118672 |
| plasmid pKNA10: | 19,581 bp | CP118674 |
REBASE acronym: KnaDS12
Org_num: 65853
All begin LV564_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKNA09 | ||||
| 145 | type II toxin-antitoxin system VapC family | |||
| 150 | S | S3.Kob8034ORF18580P (97% identity) | S3.KnaDS12ORF165P | |
| 155 | R | KbaSR745ORFIP (89% identity) | KnaDS12ORF165P | |
| 160 | S | S2.Psp054ORF26165P (65% identity) | S1.KnaDS12ORF165P | |
| 165 | M | M.Kob8034ORF18915P (98% identity) | M.KnaDS12ORF165P | |
| 170 | S | S1.Geu18890ORFLP (94% identity) | S2.KnaDS12ORF165P | |
| 175 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1185 | IS21 family transposase | |||
| 1190 | M | M.Xca609ORF10800P (61% identity) | M.KnaDS12ORF1190P | |
| 1195 | DNA topoisomerase III | |||
| 1210 | single-stranded DNA-binding protein | |||
| 1215 | M | M.Ssu3ORF2690P (67% identity) | M.KnaDS12ORF1215P | |
| 1220 | DUF3158 family protein | |||
| 3235 | ribonuclease HII | |||
| 3240 | M | M.Kxy2325ORF6315P (100% identity) | GANTC | M.KnaDS12ORF3240P |
| 3245 | DNA adenine methylase | |||
| 3240 | site-specific DNA-methyltransferase | |||
| 3245 | M | M.Kna3ORF11860P (100% identity) | M.KnaDS12ORF3245P | |
| 3250 | ankyrin repeat domain-containing protein | |||
| 5025 | 205 aa hypothetical protein | |||
| 5030 | M | M.Kxy17276ORF7505P (95% identity) | M.KnaDS12ORF5030P | |
| 5035 | DUF3164 family protein | |||
| 10485 | cytochrome-c peroxidase | |||
| 10490 | M | M.KnaRZS01I (100% identity) | GTAC | M.KnaDS12ORF10490P |
| 10495 | murein transglycosylase A | |||
| 12010 | DUF2285 domain-containing protein | |||
| 12015 | M | M.KnaRZS01ORF11810P (99% identity) | M.KnaDS12ORF12015P | |
| 12020 | IS5 family transposase | |||
| 12045 | 56 aa hypothetical protein | |||
| 12050 | RM | KnaRZS01ORF11745P (83% identity) | KnaDS12ORF12050P | |
| 12055 | type III restriction endonuclease subunit R | |||
| 12515 | DUF2840 domain-containing protein | |||
| 12520 | M | M.KhaSC3BORFGP (89% identity) | M.KnaDS12ORF12520P | |
| 12525 | replication initiator protein A | |||
| 12775 | DUF2840 domain-containing protein | |||
| 12780 | M | M.AtrBDGP1ORF14130P (83% identity) | M.KnaDS12ORF12780P | |
| 12785 | replication initiator protein A | |||
| 14540 | class II aldolase/adducin family protein | |||
| 14545 | RM | KnaRZS01ORF8840BP (75% identity) | KnaDS12ORF14545P | |
| 14550 | phosphoketolase family protein | |||
| plasmid pKNA10 | ||||
| 1070 | AAA family ATPase | |||
| 1075 | R | PspRS1AORF19630P (89% identity) | KnaDS12ORF1080P | |
| 1080 | M | M.PspRS1AORF19630P (91% identity) | M.KnaDS12ORF1080P | |
| 1085 | recombinase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9930 | 3-5 exonuclease | |||
| 9935 | M | M.KnaRZS01ORF13880P (99% identity) | M.KnaDS12ORF9935P | |
| 9940 | IS5 family transposase | |||