Salmonella enterica AUSMDU00052066 |
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Putative Salmonella enterica AUSMDU00052066 RM systems
Ref: Sikorski,M. et al. unpublished
REBASE ref # 36419
| Sequence length: | GenBank #: | |
| Chromosome: | 4,780,755 bp | CP090224 |
| plasmid pAUSMDU00052066_01: | 106,710 bp | CP090225 |
REBASE acronym: Sen52066
Org_num: 65908
All begin LWQ29_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1720 | cell division protein DamX | |||
| 1725 | M | M.StyTDamP (100% identity) | GATC | M.Sen52066DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 2205 | DUF2556 family protein | |||
| 2210 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen52066ORF2210P |
| 2215 | DNA-binding transcriptional regulator Fis | |||
| 8845 | phosphohydrolase | |||
| 8850 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen52066DcmP |
| 8855 | V | V.StyTDcmP (100% identity) | CCWGG | V.Sen52066DcmP |
| 8860 | drug/metabolite exporter YedA | |||
| 14095 | DUF550 domain-containing protein | |||
| 14100 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen52066ORF14100P |
| 14105 | ead/Ea22-like family protein | |||
| 14160 | DGQHR domain-containing protein | |||
| 14165 | M | M.StyTORF1926P (95% identity) | M.Sen52066ORF14165P | |
| 14170 | DUF4060 family protein | |||
| 19345 | 91 aa hypothetical protein | |||
| 19350 | R | Senst12ORF9665P (100% identity) | Sen52066ORF19350P | |
| 19355 | 64 aa hypothetical protein | |||
| 20435 | 3-5 exonuclease | |||
| 20440 | M | M.StyTORF4329P (100% identity) | GATC | M.Sen52066ORF20440P |
| 20445 | replication endonuclease | |||
| 22315 | TraR/DksA family transcriptional regulator | |||
| 22320 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen52066ORF22320P |
| 22325 | replication endonuclease | |||
| plasmid pAUSMDU00052066_01 | ||||
| 24050 | 76 aa hypothetical protein | |||
| 24055 | M | M.StyCORF112P (100% identity) | GATC | M.Sen52066ORF24055P |
| 24060 | 280 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8765 | shufflon system plasmid conjugative transfer | |||
| 8770 | R | StyTORF872P (100% identity) | CAAACC | Sen52066ORF8775P |
| 8775 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.Sen52066ORF8775P |
| 8780 | SpnT protein | |||
| 17085 | small effector SsaA | |||
| 17090 | R | StyTORF2507P (99% identity) | CAGAG | Sen52066ORF17095P |
| 17095 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen52066ORF17095P |
| 17100 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19200 | BrnT family toxin | |||
| 19205 | R | StyTMrrP (100% identity) | Sen52066MrrP | |
| 19210 | type I restriction-modification system | |||