Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS21925668 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- FSIS21925668 RM systems
Ref: Ge,B. unpublished
REBASE ref # 27564
| Sequence length: | GenBank #: | |
| Chromosome: | 5,071,457 bp | CP119478 |
| plasmid pFSIS21925668-1: | 89,414 bp | CP119479 |
REBASE acronym: Sen25668
Org_num: 65910
All begin F9155_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21055 | restriction endonuclease | |||
| 21060 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen25668ORF21065P |
| 21065 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen25668ORF21065P |
| 21070 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen25668ORF21065P |
| 21075 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2005 | cell division protein DamX | |||
| 2010 | M | M.StyTDamP (100% identity) | GATC | M.Sen25668DamP |
| 2015 | ribulose-phosphate 3-epimerase | |||
| 2500 | DUF2556 family protein | |||
| 2505 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen25668ORF2505P |
| 2510 | DNA-binding transcriptional regulator Fis | |||
| 3420 | DUF2732 family protein | |||
| 3425 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen25668ORF3425P |
| 3430 | replication endonuclease | |||
| 5825 | IS6-like element IS26 family transposase | |||
| 5830 | M | M.StyCORF187P (49% identity) | M.Sen25668ORF5830P | |
| 5835 | thermonuclease family protein | |||
| 6515 | Com family DNA-binding transcriptional | |||
| 6520 | M | M.SenYU39ORF1896P (100% identity) | M.Sen25668ORF6520P | |
| 6525 | ribosome-associated translation inhibitor RaiA | |||
| 6745 | ead/Ea22-like family protein | |||
| 6750 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen25668ORF6750P |
| 6755 | DUF551 domain-containing protein | |||
| 10090 | PerC family transcriptional regulator | |||
| 10095 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen25668ORF10095P |
| 10100 | RusA family crossover junction | |||
| 10345 | phosphohydrolase | |||
| 10350 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen25668DcmP |
| 10355 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen25668DcmP |
| 10360 | drug/metabolite exporter YedA | |||
| 23140 | LexA family transcriptional regulator | |||
| 23145 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen25668ORF23145P |
| 23150 | PerC family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18750 | small effector SsaA | |||
| 18755 | R | StyUK1IP (99% identity) | CAGAG | Sen25668ORF18760P |
| 18760 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen25668ORF18760P |
| 18765 | MFS transporter | |||
| plasmid pFSIS21925668-1 | ||||
| 25295 | 69 aa hypothetical protein | |||
| 25300 | M | M.SenSP5ORF35P (100% identity) | M.Sen25668ORF25300P | |
| 25305 | R | SenSP5ORF35P (100% identity) | Sen25668ORF25300P | |
| 25310 | IS3-like element ISSen4 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21050 | BrnT family toxin | |||
| 21055 | R | StyUK1MrrP (100% identity) | Sen25668Mrr2P | |
| 21060 | type I restriction-modification system | |||
| 21240 | protease Lon-related BREX system protein BrxL | |||
| 21245 | R | StyLTMrrP (100% identity) | Sen25668MrrP | |
| 21250 | AAA domain-containing protein | |||