Campylobacter jejuni BDS5 |
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Putative Campylobacter jejuni BDS5 RM systems
Ref: He,Y. and Reed,S. unpublished
REBASE ref # 36315
Complete sequence: 1,924,169 bp
GenBank #: CP118900
REBASE acronym: CjeBDS5
Org_num: 65447
All begin PXI10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9210 | NAD(P)-dependent alcohol dehydrogenase | |||
| 9215 | R | CjeCGORF1590P (99% identity) | CTANNNNNNNGTC | CjeBDS5ORF9235P |
| 9220 | ATP-binding protein | |||
| 9225 | RloB family protein | |||
| 9230 | S | S.Cla10973ORF3450P (100% identity) | CTANNNNNNNGTC | S.CjeBDS5ORF9235P |
| 9235 | M | M.Cje5148ORF600P (100% identity) | CTANNNNNNNGTC | M.CjeBDS5ORF9235P |
| 9240 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1030 | translation initiation factor IF-3 | |||
| 1035 | M | M.Csp6461ORF2585P (100% identity) | RAATTY | M.CjeBDS5ORF1035P |
| 1040 | S6 family peptidase | |||
| 1215 | dihydroorotase | |||
| 1220 | RM | Cje255ORF4860P (99% identity) | CjeBDS5ORF1220P | |
| 1225 | class I SAM-dependent methyltransferase | |||
| 1290 | rod shape-determining protein MreC | |||
| 1295 | C | C.Cla16712ORF409P (100% identity) | C.CjeBDS5ORF1305P | |
| ??? | R | Cje55ORF1355P (100% identity) | ACTAGT | CjeBDS5ORF1305P |
| 1305 | M | M.Cje1007ORF1310P (100% identity) | ACTAGT | M.CjeBDS5ORF1305P |
| 1310 | IS1595-like element ISCaje5 family transposase | |||
| 2240 | phage virion morphogenesis protein | |||
| 2245 | M | M.CjeBDS5ORF4350P (100% identity) | M.CjeBDS5ORF2245P | |
| 2250 | 95 aa hypothetical protein | |||
| 3865 | acetate kinase | |||
| 3870 | RM | Cje5151ORF1750P (99% identity) | GKAAYC | CjeBDS5ORF3870P |
| 3875 | 163 aa hypothetical protein | |||
| 4345 | phage virion morphogenesis protein | |||
| 4350 | M | M.CjeBDS5ORF2245P (100% identity) | M.CjeBDS5ORF4350P | |
| 4355 | 95 aa hypothetical protein | |||
| 6820 | NAD-dependent deacetylase | |||
| 6825 | RM | Cje5128ORF4800P (99% identity) | CjeBDS5ORF6825P | |
| 6830 | endonuclease MutS2 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 680 | ribosome maturation factor RimP | |||
| 685 | R | CjeJ007McrBP (100% identity) | CjeBDS5McrBP | |
| 690 | R | CjeNWMcrCP (100% identity) | CjeBDS5McrCP | |
| 695 | metal ABC transporter permease | |||