Pectobacterium colocasium PL155 |
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Putative Pectobacterium colocasium PL155 RM systems
Ref: Klair,D. et al. unpublished
REBASE ref # 36330
Complete sequence: 5,026,493 bp
GenBank #: CP118921
REBASE acronym: PcoPL155
Org_num: 65496
All begin PJ912_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3385 | helix-turn-helix domain-containing protein | |||
| 3390 | R | PcaHG49ORFAP (99% identity) | PcoPL155ORF3395P | |
| ??? | M | M.PcaHG49ORFAP (99% identity) | M.PcoPL155ORF3395P | |
| 3410 | 41 aa hypothetical protein | |||
| 3415 | S | S.Eco4282ORFDP (20% identity) | S1.PcoPL155ORF3395P | |
| ??? | S | S.PspDV1ORF870P (16% identity) | S2.PcoPL155ORF3395P | |
| 3420 | S | S3.Psp152ORF3220P (75% identity) | S3.PcoPL155ORF3395P | |
| ??? | S | S4.Psp152ORF3220P (100% identity) | S4.PcoPL155ORF3395P | |
| 3425 | DEAD/DEAH box helicase family protein | |||
| 12515 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| ??? | R | Psp152ORF11820P (99% identity) | PcoPL155ORF12560P | |
| 12545 | 98 aa hypothetical protein | |||
| 12550 | 109 aa hypothetical protein | |||
| 12555 | 54 aa hypothetical protein | |||
| ??? | M | M.DzeMS2ORF21310P (82% identity) | M.PcoPL155ORF12560P | |
| 12575 | S | S1.VchL1271ORFEP (77% identity) | S1.PcoPL155ORF12560P | |
| ??? | S | S1.Psp152ORF11820P (52% identity) | S2.PcoPL155ORF12560P | |
| 12580 | S | S2.Psp152ORF11820P (100% identity) | S3.PcoPL155ORF12560P | |
| 12585 | S | S3.Psp152ORF11820P (98% identity) | S4.PcoPL155ORF12560P | |
| 12590 | S | S4.Psp152ORF11820P (100% identity) | S5.PcoPL155ORF12560P | |
| 12595 | 96 aa hypothetical protein | |||
| 16090 | SprT family zinc-dependent metalloprotease | |||
| 16095 | R | Psp152ORF15125P (99% identity) | PcoPL155ORF16135P | |
| 16100 | 59 aa hypothetical protein | |||
| 16105 | 97 aa hypothetical protein | |||
| 16110 | 84 aa hypothetical protein | |||
| 16115 | macro domain-containing protein | |||
| 16120 | DUF4433 domain-containing protein | |||
| 16125 | S | S.Psp152ORF15125P (12% identity) | S3.PcoPL155ORF16135P | |
| ??? | S | S.Psp152ORF15125P (32% identity) | S2.PcoPL155ORF16135P | |
| ??? | S | S.Psp152ORF15125P (56% identity) | S1.PcoPL155ORF16135P | |
| 16135 | M | M.AheTL13ORF2485P (89% identity) | M.PcoPL155ORF16135P | |
| 16140 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3360 | AlpA family transcriptional regulator | |||
| 3365 | R | Psp152ORF3205P (100% identity) | PcoPL155ORF3365P | |
| 3370 | helix-turn-helix transcriptional regulator | |||
| 9425 | DNA topoisomerase III | |||
| 9430 | M | M.Psp152ORF8835P (99% identity) | M.PcoPL155ORF9430P | |
| 9435 | GTPase | |||
| 10440 | ribulose-phosphate 3-epimerase | |||
| 10445 | M | M.Psp152DamP (95% identity) | GATC | M.PcoPL155DamP |
| 10450 | SPOR domain-containing protein | |||
| 22610 | 270 aa hypothetical protein | |||
| 22615 | R | PbrMORFDP (87% identity) | PcoPL155ORF22615P | |
| 22620 | 42 aa hypothetical protein | |||