Vagococcus lutrae VF20 |
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Putative Vagococcus lutrae VF20 RM systems
Ref: Fu,S. et al. unpublished
REBASE ref # 36318
Complete sequence: 1,981,468 bp
GenBank #: CP090216
REBASE acronym: VluVF20
Org_num: 65534
All begin LVJ09_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2930 | DUF1292 domain-containing protein | |||
| 2935 | S | S.VluAT03ORF1385P (64% identity) | S.VluVF20ORF2935P | |
| 2940 | ISL3 family transposase | |||
| 7475 | AAA family ATPase | |||
| 7480 | R | Sdy611ORF692P (77% identity) | VluVF20ORF7515P | |
| 7485 | TIR domain-containing protein | |||
| 7490 | DUF6430 domain-containing protein | |||
| 7495 | S | S1.LlaA12ORF1262P (48% identity) | S3.VluVF20ORF7515P | |
| 7500 | tyrosine-type recombinase/integrase | |||
| 7505 | S | S.LfoEE5e5ORF8620P (40% identity) | S2.VluVF20ORF7515P | |
| 7510 | S | S1.Lra195ORF10670P (67% identity) | S1.VluVF20ORF7515P | |
| 7515 | M | M.LfoEE5d7ORF8620P (85% identity) | M.VluVF20ORF7515P | |
| 7520 | ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 500 | 30S ribosomal protein S9 | |||
| 505 | M | M.EfaME3ORF15425P (79% identity) | M.VluVF20ORF505P | |
| 510 | RM | Bme201ORFBP (75% identity) | VluVF20ORF505P | |
| 515 | SIR2 family protein | |||
| 6455 | AAA family ATPase | |||
| 6460 | R | Bmy572ORF27485P (51% identity) | VluVF20ORF6465P | |
| 6465 | M | M.Aba6052ORF6500P (69% identity) | M.VluVF20ORF6465P | |
| 6470 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 520 | ATP-binding protein | |||
| 525 | R | Lco3167McrBP (44% identity) | VluVF20McrB2P | |
| 530 | R | Esp375McrCP (40% identity) | VluVF20McrC2P | |
| 535 | AraC family transcriptional regulator | |||
| 1515 | (deoxy)nucleoside triphosphate | |||
| 1520 | R | VluAT46bORF8430P (99% identity) | VluVF20ORF1520P | |
| 1525 | dihydroxyacetone kinase transcriptional | |||
| 7465 | 114 aa hypothetical protein | |||
| 7470 | R | OorB1McrCP (63% identity) | VluVF20McrCP | |
| 7475 | R | LfoEE5e5McrBP (73% identity) | VluVF20McrBP | |
| 7480 | type I restriction endonuclease subunit R | |||