Salmonella enterica subsp. enterica serovar Derby RM006 |
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Putative Salmonella enterica subsp. enterica serovar Derby RM006 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,825,435 bp
GenBank #: CP117301
REBASE acronym: SenRM006
Org_num: 65356
All begin PQP83_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1725 | cell division protein DamX | |||
| 1730 | M | M.SenRM079Dam3P (100% identity) | GATC | M.SenRM006DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM006ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 5330 | integrase domain-containing protein | |||
| 5335 | M | M.SenRM005ORF5335P (100% identity) | M.SenRM006ORF5335P | |
| 5340 | AAA family ATPase | |||
| 5405 | PerC family transcriptional regulator | |||
| 5410 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.SenRM006ORF5410P |
| 5415 | LexA family transcriptional regulator | |||
| 5440 | 67 aa hypothetical protein | |||
| 5445 | M | M.SflLIN17ORF17405P (100% identity) | M.SenRM006ORF5445P | |
| 5450 | phage holin, lambda family | |||
| 9080 | phosphohydrolase | |||
| 9085 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.SenRM006DcmP |
| 9090 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM006DcmP |
| 9095 | drug/metabolite exporter YedA | |||
| 17230 | phage holin, lambda family | |||
| 17235 | M | M.SensSZL38ORF10585P (100% identity) | M.SenRM006ORF17235P | |
| 17240 | 67 aa hypothetical protein | |||
| 17265 | LexA family transcriptional regulator | |||
| 17270 | M | M.SflN101ORF11410P (100% identity) | GATC | M.SenRM006ORF17270P |
| 17275 | PerC family transcriptional regulator | |||
| 19545 | YebC/PmpR family DNA-binding transcriptional | |||
| 19550 | R | SensTJX21ORF12025P (100% identity) | SenRM006ORF19550P | |
| 19555 | fosfomycin resistance glutathione transferase | |||
| 19575 | RM | SensTJX21ORF12050P (100% identity) | SenRM006ORF19575P | |
| 19580 | DEAD/DEAH box helicase | |||
| 21190 | LexA family transcriptional regulator | |||
| 21195 | M | M.Sso90ORF15820P (100% identity) | GATC | M.SenRM006ORF21195P |
| 21200 | 28 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5655 | MFS transporter | |||
| 5660 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.SenRM006ORF5660P |
| 5665 | R | StyUK1IP (99% identity) | CAGAG | SenRM006ORF5660P |
| 5670 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19580 | DEAD/DEAH box helicase | |||
| 19585 | R | SensTJX21ORF12060P (100% identity) | SenRM006ORF19585P | |
| 19590 | 104 aa hypothetical protein | |||