Salmonella enterica subsp. enterica serovar Derby RM001 |
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Putative Salmonella enterica subsp. enterica serovar Derby RM001 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,845,631 bp
GenBank #: CP117322
REBASE acronym: SenRM001
Org_num: 65351
All begin PQP82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19540 | 322 aa hypothetical protein | |||
| 19545 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | SenRM001ORF19550P |
| 19550 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.SenRM001ORF19550P |
| 19555 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.SenRM001ORF19550P |
| 19560 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | cell division protein DamX | |||
| 1735 | M | M.StyTDamP (100% identity) | GATC | M.SenRM001DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 family protein | |||
| 2225 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM001ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 5335 | integrase domain-containing protein | |||
| 5340 | M | M.SenRM006ORF5335P (100% identity) | M.SenRM001ORF5340P | |
| 5345 | AAA family ATPase | |||
| 5410 | PerC family transcriptional regulator | |||
| 5415 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.SenRM001ORF5415P |
| 5420 | LexA family transcriptional regulator | |||
| 13590 | drug/metabolite exporter YedA | |||
| 13595 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM001DcmP |
| 13600 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.SenRM001DcmP |
| 13605 | phosphohydrolase | |||
| 17370 | phage holin, lambda family | |||
| 17375 | M | M.SensSZL38ORF10585P (100% identity) | M.SenRM001ORF17375P | |
| 17380 | 67 aa hypothetical protein | |||
| 17405 | LexA family transcriptional regulator | |||
| 17410 | M | M.SflN101ORF11410P (100% identity) | GATC | M.SenRM001ORF17410P |
| 17415 | PerC family transcriptional regulator | |||
| 19685 | YebC/PmpR family DNA-binding transcriptional | |||
| 19690 | R | SensTJX21ORF12025P (100% identity) | SenRM001ORF19690P | |
| 19695 | fosfomycin resistance glutathione transferase | |||
| 19715 | RM | SensTJX21ORF12050P (100% identity) | SenRM001ORF19715P | |
| 19720 | DEAD/DEAH box helicase | |||
| 21330 | LexA family transcriptional regulator | |||
| 21335 | M | M.Sso90ORF15820P (100% identity) | GATC | M.SenRM001ORF21335P |
| 21340 | 28 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19720 | DEAD/DEAH box helicase | |||
| 19725 | R | SensTJX21ORF12060P (100% identity) | SenRM001ORF19725P | |
| 19730 | 104 aa hypothetical protein | |||