Salmonella enterica subsp. enterica serovar Newport RM108 |
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Putative Salmonella enterica subsp. enterica serovar Newport RM108 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,770,448 bp
GenBank #: CP117326
REBASE acronym: SenRM108
Org_num: 65377
All begin PQQ05_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1825 | cell division protein DamX | |||
| 1830 | M | M.StyTDamP (100% identity) | GATC | M.SenRM108DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM108ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 9160 | phosphohydrolase | |||
| 9165 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenRM108DcmP |
| 9170 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenRM108DcmP |
| 9175 | drug/metabolite exporter YedA | |||
| 19690 | YebC/PmpR family DNA-binding transcriptional | |||
| 19695 | R | SenS224ORF20045P (100% identity) | SenRM108ORF19695P | |
| 19700 | primase-like DNA-binding domain-containing | |||
| 20080 | 92 aa hypothetical protein | |||
| 20085 | M | M.Sen845ORF3315P (99% identity) | M1.SenRM108ORF20085P | |
| 20090 | AsnC family protein | |||
| 20095 | M | M1.Sen58605ORF17010P (99% identity) | M2.SenRM108ORF20085P | |
| 20100 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17340 | small effector SsaA | |||
| 17345 | R | Ssp6947IIP (100% identity) | CAGAG | SenRM108ORF17350P |
| 17350 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenRM108ORF17350P |
| 17355 | MFS transporter | |||