Salmonella enterica subsp. enterica serovar Saintpaul RM106 |
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Putative Salmonella enterica subsp. enterica serovar Saintpaul RM106 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
| Sequence length: | GenBank #: | |
| Chromosome: | 4,729,938 bp | CP117327 |
| plasmid pRM106_1: | 114,639 bp | CP117328 |
REBASE acronym: SenRM106
Org_num: 65378
All begin PQP95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19255 | restriction endonuclease | |||
| 19260 | R | SenRM095ORF20330P (99% identity) | GAGNNNNNNRTAYG | SenRM106ORF19265P |
| 19265 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenRM106ORF19265P |
| 19270 | S | S.StyUK1II (99% identity) | GAGNNNNNNRTAYG | S.SenRM106ORF19265P |
| 19275 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.SenRM106DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM106ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 8900 | phosphohydrolase | |||
| 8905 | M | M.SenWDcmP (100% identity) | CCWGG | M.SenRM106DcmP |
| 8910 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM106DcmP |
| 8915 | drug/metabolite exporter YedA | |||
| 19395 | YebC/PmpR family DNA-binding transcriptional | |||
| 19400 | R | SenS25ORF20520P (100% identity) | SenRM106ORF19400P | |
| 19405 | malate transporter | |||
| 19405 | malate transporter | |||
| 19410 | M | M.SspZ69DndBP (100% identity) | M.SenRM106DndBP | |
| 19415 | DNA phosphorothioation system sulfurtransferase | |||
| 19410 | DNA sulfur modification protein DndB | |||
| 19415 | M | M.SenS25DndCP (100% identity) | M.SenRM106DndCP | |
| 19420 | DNA sulfur modification protein DndD | |||
| 19415 | DNA phosphorothioation system sulfurtransferase | |||
| 19420 | M | M.SenS0870DndDP (100% identity) | M.SenRM106DndDP | |
| 19425 | DNA sulfur modification protein DndE | |||
| 19420 | DNA sulfur modification protein DndD | |||
| 19425 | M | M.SspZ69DndEP (100% identity) | M.SenRM106DndEP | |
| 19430 | HNH endonuclease family protein | |||
| 19435 | DUF262 domain-containing protein | |||
| 19440 | R | SenS25DptHP (100% identity) | SenRM106DptHP | |
| 19445 | DNA phosphorothioation-dependent restriction | |||
| 19445 | DNA phosphorothioation-dependent restriction | |||
| 19450 | R | SenS25DptFP (100% identity) | SenRM106DptFP | |
| 19455 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pRM106_1 | ||||
| 23000 | 103 aa hypothetical protein | |||
| 23005 | M | M.StyR64ORFAP (100% identity) | M.SenRM106ORF23005P | |
| 23010 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17050 | small effector SsaA | |||
| 17055 | R | SenS133ORF17655P (100% identity) | CAGAG | SenRM106ORF17060P |
| 17060 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM106ORF17060P |
| 17065 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19250 | BrnT family toxin | |||
| 19255 | R | StyUK1MrrP (100% identity) | SenRM106MrrP | |
| 19260 | type I restriction-modification system | |||