Salmonella enterica subsp. enterica serovar Muenster RM055 |
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Putative Salmonella enterica subsp. enterica serovar Muenster RM055 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,695,492 bp
GenBank #: CP117332
REBASE acronym: SenRM055
Org_num: 65370
All begin PQP79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19395 | toll/interleukin-1 receptor domain-containing | |||
| 19400 | M | M.SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | M.SenRM055ORF19400P |
| 19405 | S | S.SenS708ORF17810P (100% identity) | TAAGNNNNNTTC | S.SenRM055ORF19400P |
| 19410 | R | SenS708ORF17810P (99% identity) | TAAGNNNNNTTC | SenRM055ORF19400P |
| 19415 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1745 | cell division protein DamX | |||
| 1750 | M | M.StyTDamP (100% identity) | GATC | M.SenRM055DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2235 | DUF2556 family protein | |||
| 2240 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM055ORF2240P |
| 2245 | DNA-binding transcriptional regulator Fis | |||
| 5425 | TraR/DksA family transcriptional regulator | |||
| 5430 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.SenRM055ORF5430P |
| 5435 | replication endonuclease | |||
| 9075 | phosphohydrolase | |||
| 9080 | M | M.SenS688DcmP (100% identity) | CCWGG | M.SenRM055DcmP |
| 9085 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM055DcmP |
| 9090 | drug/metabolite exporter YedA | |||
| 19270 | DeoR family transcriptional regulator | |||
| 19275 | R | SenS708ORF17695P (100% identity) | CCWGG | SenRM055ORF19280P |
| 19280 | M | M.SenRM074ORF19685P (100% identity) | CCWGG | M.SenRM055ORF19280P |
| 19285 | AAA domain-containing protein | |||
| 19435 | 69 aa hypothetical protein | |||
| 19440 | R | SenRM074ORF19845P (100% identity) | GAAC | SenRM055ORF19440P |
| 19445 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17005 | small effector SsaA | |||
| 17010 | R | Sens30601ORF17060P (100% identity) | CAGAG | SenRM055ORF17015P |
| 17015 | M | M.SenRM074ORF17420P (100% identity) | CAGAG | M.SenRM055ORF17015P |
| 17020 | MFS transporter | |||