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Putative Salmonella enterica subsp. enterica serovar Dublin RM111 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,841,684 bp
GenBank #: CP117340
REBASE acronym: SenRM111
Org_num: 65366
All begin PQQ02_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20420 | 3-5 exonuclease | |||
20425 | S | S2.Ssp3CORF11555P (100% identity) | S2.SenRM111ORF20445P | |
20430 | N-6 DNA methylase | |||
20435 | 44 aa hypothetical protein | |||
20440 | restriction endonuclease | |||
20445 | M | M.StySBLI (100% identity) | M.SenRM111ORF20445P | |
??? | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S1.SenRM111ORF20445P |
20460 | R | Ssp3CORF11555P (100% identity) | SenRM111ORF20445P | |
20465 | endonuclease NucS | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1780 | cell division protein DamX | |||
1785 | M | M.StyTDamP (99% identity) | GATC | M.SenRM111DamP |
1790 | ribulose-phosphate 3-epimerase | |||
2270 | DUF2556 family protein | |||
2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM111ORF2275P |
2280 | DNA-binding transcriptional regulator Fis | |||
5455 | TraR/DksA family transcriptional regulator | |||
5460 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.SenRM111ORF5460P |
5465 | replication endonuclease | |||
5470 | 62 aa hypothetical protein | |||
5475 | 99 aa hypothetical protein | |||
5480 | 268 aa hypothetical protein | |||
5485 | 60 aa hypothetical protein | |||
5490 | R | SenRM105ORF5450P (100% identity) | SenRM111ORF5460P | |
5495 | HEPN domain-containing protein | |||
9090 | 249 aa hypothetical protein | |||
9095 | M | M.Ssp3CORF22905P (100% identity) | M.SenRM111ORF9095P | |
9100 | ead/Ea22-like family protein | |||
9170 | PerC family transcriptional regulator | |||
9175 | M | M.Ssp3CORF22825P (100% identity) | GATC | M.SenRM111ORF9175P |
9180 | RusA family crossover junction | |||
14100 | drug/metabolite exporter YedA | |||
14105 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM111DcmP |
14110 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.SenRM111DcmP |
14115 | phosphohydrolase | |||
14885 | DUF550 domain-containing protein | |||
14890 | M | M.Ssp3CORF17125P (100% identity) | M.SenRM111ORF14890P | |
14895 | ead/Ea22-like family protein | |||
20575 | YebC/PmpR family DNA-binding transcriptional | |||
20580 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenRM111ORF20580P |
20585 | IS3 family transposase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
20435 | 44 aa hypothetical protein | |||
20440 | R | Ssp3CMrrP (100% identity) | SenRM111MrrP | |
20445 | class I SAM-dependent DNA methyltransferase |