Salmonella enterica subsp. enterica serovar Dublin RM105 |
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Putative Salmonella enterica subsp. enterica serovar Dublin RM105 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,843,892 bp
GenBank #: CP117343
REBASE acronym: SenRM105
Org_num: 65365
All begin PQP76_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.SenRM105DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM105ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 5445 | TraR/DksA family transcriptional regulator | |||
| 5450 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.SenRM105ORF5450P |
| 5455 | replication endonuclease | |||
| 5460 | 62 aa hypothetical protein | |||
| 5465 | 99 aa hypothetical protein | |||
| 5470 | 268 aa hypothetical protein | |||
| 5475 | 60 aa hypothetical protein | |||
| 5480 | R | SenRM111ORF5460P (100% identity) | SenRM105ORF5450P | |
| 5485 | HEPN domain-containing protein | |||
| 9080 | 249 aa hypothetical protein | |||
| 9085 | M | M.Ssp3CORF22905P (100% identity) | M.SenRM105ORF9085P | |
| 9090 | ead/Ea22-like family protein | |||
| 9160 | PerC family transcriptional regulator | |||
| 9165 | M | M.Ssp3CORF22825P (100% identity) | GATC | M.SenRM105ORF9165P |
| 9170 | RusA family crossover junction | |||
| 14090 | drug/metabolite exporter YedA | |||
| 14095 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM105DcmP |
| 14100 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.SenRM105DcmP |
| 14105 | phosphohydrolase | |||
| 14885 | DUF550 domain-containing protein | |||
| 14890 | M | M.Ssp3CORF17125P (100% identity) | M.SenRM105ORF14890P | |
| 14895 | ead/Ea22-like family protein | |||
| 20590 | YebC/PmpR family DNA-binding transcriptional | |||
| 20595 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenRM105ORF20595P |
| 20600 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18250 | small effector SsaA | |||
| 18255 | R | Ssp3CORF13760P (100% identity) | CAGAG | SenRM105ORF18260P |
| 18260 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM105ORF18260P |
| 18265 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20450 | 44 aa hypothetical protein | |||
| 20455 | R | Ssp3CMrrP (100% identity) | SenRM105MrrP | |
| 20460 | class I SAM-dependent DNA methyltransferase | |||