Salmonella enterica subsp. enterica serovar Heidelberg RM101 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg RM101 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
| Sequence length: | GenBank #: | |
| Chromosome: | 4,775,084 bp | CP117348 |
| plasmid pRM101_1: | 180,389 bp | CP117349 |
| plasmid pRM101_2: | 86,233 bp | CP117350 |
REBASE acronym: SenRM101
Org_num: 65369
All begin PQQ11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19885 | restriction endonuclease | |||
| 19890 | R | StyUK1IIP (99% identity) | GAGNNNNNNRTAYG | SenRM101ORF19895P |
| 19895 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenRM101ORF19895P |
| 19900 | S | S.SenW714ORF20250P (100% identity) | GAGNNNNNNRTAYG | S.SenRM101ORF19895P |
| 19905 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1935 | cell division protein DamX | |||
| 1940 | M | M.StyTDamP (100% identity) | GATC | M.SenRM101DamP |
| 1945 | ribulose-phosphate 3-epimerase | |||
| 2425 | DUF2556 family protein | |||
| 2430 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM101ORF2430P |
| 2435 | DNA-binding transcriptional regulator Fis | |||
| 9350 | phosphohydrolase | |||
| 9355 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenRM101DcmP |
| 9360 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenRM101DcmP |
| 9365 | drug/metabolite exporter YedA | |||
| 14470 | YqaJ viral recombinase family protein | |||
| 14475 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenRM101ORF14475P |
| 14480 | DUF4060 family protein | |||
| 20025 | YebC/PmpR family DNA-binding transcriptional | |||
| 20030 | R | Sens12373ORF19550P (100% identity) | SenRM101ORF20030P | |
| 20035 | fosfomycin resistance glutathione transferase | |||
| 20060 | DEAD/DEAH box helicase | |||
| 20065 | R | Ssp8103ORF19050P (100% identity) | SenRM101ORF20065P | |
| 20070 | 104 aa hypothetical protein | |||
| plasmid pRM101_1 | ||||
| 24035 | IS1 family transposase | |||
| 24040 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.SenRM101ORF24040P |
| 24045 | R | Ssp3CORF24390P (100% identity) | CCWGG | SenRM101ORF24040P |
| 24050 | IS6-like element IS26 family transposase | |||
| plasmid pRM101_2 | ||||
| 24305 | 103 aa hypothetical protein | |||
| 24310 | M | M.SspPIBORF23080P (100% identity) | M.SenRM101ORF24310P | |
| 24315 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17565 | small effector SsaA | |||
| 17570 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenRM101ORF17575P |
| 17575 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenRM101ORF17575P |
| 17580 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19880 | BrnT family toxin | |||
| 19885 | R | StyUK1MrrP (100% identity) | SenRM101MrrP | |
| 19890 | type I restriction-modification system | |||