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Putative Salmonella enterica subsp. enterica serovar Dublin RM099 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,843,403 bp
GenBank #: CP117354
REBASE acronym: SenRM099
Org_num: 65362
All begin PQP84_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20445 | 3-5 exonuclease | |||
20450 | S | S2.Ssp3CORF11555P (100% identity) | S.SenRM099ORF20455P | |
20455 | M | M.SenRM043ORF20520P (100% identity) | M.SenRM099ORF20455P | |
20460 | 44 aa hypothetical protein | |||
20465 | restriction endonuclease | |||
20470 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.SenRM099ORF20470P |
??? | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.SenRM099ORF20470P |
20485 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | SenRM099ORF20470P |
20490 | endonuclease NucS | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1785 | cell division protein DamX | |||
1790 | M | M.StyTDamP (100% identity) | GATC | M.SenRM099DamP |
1795 | ribulose-phosphate 3-epimerase | |||
2275 | DUF2556 family protein | |||
2280 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM099ORF2280P |
2285 | DNA-binding transcriptional regulator Fis | |||
5455 | TraR/DksA family transcriptional regulator | |||
5460 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.SenRM099ORF5460P |
5465 | replication endonuclease | |||
5470 | 62 aa hypothetical protein | |||
5475 | 99 aa hypothetical protein | |||
5480 | 268 aa hypothetical protein | |||
5485 | 60 aa hypothetical protein | |||
5490 | R | SenRM111ORF5460P (100% identity) | SenRM099ORF5460P | |
5495 | HEPN domain-containing protein | |||
9090 | 249 aa hypothetical protein | |||
9095 | M | M.Ssp3CORF22905P (100% identity) | M.SenRM099ORF9095P | |
9100 | ead/Ea22-like family protein | |||
9170 | PerC family transcriptional regulator | |||
9175 | M | M.Ssp3CORF22825P (100% identity) | GATC | M.SenRM099ORF9175P |
9180 | RusA family crossover junction | |||
14100 | drug/metabolite exporter YedA | |||
14105 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM099DcmP |
14110 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.SenRM099DcmP |
14115 | phosphohydrolase | |||
14890 | DUF550 domain-containing protein | |||
14895 | M | M.Ssp3CORF17125P (100% identity) | M.SenRM099ORF14895P | |
14900 | ead/Ea22-like family protein | |||
20600 | YebC/PmpR family DNA-binding transcriptional | |||
20605 | R | SspSAL045ORF19515P (100% identity) | GAAC | SenRM099ORF20605P |
20610 | IS3 family transposase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
18255 | small effector SsaA | |||
18260 | R | Ssp3CORF13760P (100% identity) | CAGAG | SenRM099ORF18265P |
18265 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM099ORF18265P |
18270 | MFS transporter |