Salmonella enterica subsp. enterica serovar Uganda RM017 |
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Putative Salmonella enterica subsp. enterica serovar Uganda RM017 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,805,034 bp
GenBank #: CP117394
REBASE acronym: SenRM017
Org_num: 65396
All begin PQP77_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | DUF2556 family protein | |||
| 2185 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM017ORF2185P |
| 2190 | DNA-binding transcriptional regulator Fis | |||
| 6255 | 67 aa hypothetical protein | |||
| 6260 | M | M.SenRM018ORF6255P (100% identity) | M.SenRM017ORF6260P | |
| 6265 | DnaT-like ssDNA-binding domain-containing | |||
| 9175 | phosphohydrolase | |||
| 9180 | M | M.SenRM018DcmP (100% identity) | CCWGG | M.SenRM017DcmP |
| 9185 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM017DcmP |
| 9190 | drug/metabolite exporter YedA | |||
| 15010 | replication endonuclease | |||
| 15015 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.SenRM017ORF15015P |
| 15020 | TraR/DksA family transcriptional regulator | |||
| 20220 | integrase | |||
| 20225 | R | SenXORF20240P (100% identity) | SenRM017ORF20225P | |
| 20230 | adenosine deaminase | |||
| 20385 | DUF262 domain-containing protein | |||
| 20390 | RM | SenRM018ORF20380P (100% identity) | SenRM017ORF20390P | |
| 20395 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17860 | small effector SsaA | |||
| 17865 | R | StyUK1IP (99% identity) | CAGAG | SenRM017ORF17870P |
| 17870 | M | M.SenRM018ORF17855P (100% identity) | CAGAG | M.SenRM017ORF17870P |
| 17875 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6200 | tyrosine-type recombinase/integrase | |||
| 6205 | M | M.SenRM018ORF6200P (100% identity) | GATC | M.SenRM017ORF6205P |
| 6210 | DUF1317 family protein | |||