Salmonella enterica subsp. enterica serovar Typhi S3 |
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Putative Salmonella enterica subsp. enterica serovar Typhi S3 RM systems
Ref: Ho,P.-L. and Cao,H. unpublished
REBASE ref # 36286
| Sequence length: | GenBank #: | |
| Chromosome: | 4,812,716 bp | CP118537 |
| plasmid p84390bp: | 84,390 bp | CP118538 |
REBASE acronym: SenTS3
Org_num: 65381
All begin O1A30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19390 | restriction endonuclease | |||
| 19395 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | SenTS3ORF19400P |
| 19400 | M | M.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | M.SenTS3ORF19400P |
| 19405 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.SenTS3ORF19400P |
| 19410 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.StyTDamP (100% identity) | GATC | M.SenTS3DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 2380 | DUF2556 family protein | |||
| 2385 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenTS3ORF2385P |
| 2390 | DNA-binding transcriptional regulator Fis | |||
| 9240 | DUF4060 family protein | |||
| 9245 | M | M.StyTORF1926P (95% identity) | M.SenTS3ORF9245P | |
| 9250 | DGQHR domain-containing protein | |||
| 14530 | drug/metabolite exporter YedA | |||
| 14535 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenTS3DcmP |
| 14540 | M | M.StyTDcmP (100% identity) | CCWGG | M.SenTS3DcmP |
| 14545 | phosphohydrolase | |||
| 19525 | YebC/PmpR family DNA-binding transcriptional | |||
| 19530 | R | Senst12ORF9665P (100% identity) | SenTS3ORF19530P | |
| 19535 | 64 aa hypothetical protein | |||
| 20610 | 3-5 exonuclease | |||
| 20615 | M | M.StyTORF4329P (100% identity) | GATC | M.SenTS3ORF20615P |
| 20620 | replication endonuclease | |||
| 22980 | TraR/DksA family transcriptional regulator | |||
| 22985 | M | M.StyTORF3409P (100% identity) | GATC | M.SenTS3ORF22985P |
| 22990 | replication endonuclease | |||
| plasmid p84390bp | ||||
| 23910 | DUF262 domain-containing protein | |||
| 23915 | RM | SenPK1ORF23900P (99% identity) | ATGAAG | SenTS3ORF23915P |
| 23920 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6310 | MFS transporter | |||
| 6315 | M | M.StyTORF2507P (100% identity) | CAGAG | M.SenTS3ORF6315P |
| 6320 | R | StyTORF2507P (99% identity) | CAGAG | SenTS3ORF6315P |
| 6325 | small effector SsaA | |||
| 14615 | SpnT protein | |||
| 14620 | M | M.SmaBWH35ORF16840P (100% identity) | CAAACC | M.SenTS3ORF14620P |
| 14625 | R | StyTORF872P (100% identity) | CAAACC | SenTS3ORF14620P |
| 14630 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19385 | BrnT family toxin | |||
| 19390 | R | StyTMrrP (100% identity) | SenTS3MrrP | |
| 19395 | type I restriction-modification system | |||