Salmonella enterica subsp. enterica serovar Typhimurium RM096 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium RM096 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,863,964 bp
GenBank #: CP117357
REBASE acronym: SenRM096
Org_num: 65390
All begin PQQ15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20205 | restriction endonuclease | |||
| 20210 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenRM096ORF20215P |
| 20215 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenRM096ORF20215P |
| 20220 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenRM096ORF20215P |
| 20225 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenRM096DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM096ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9575 | PerC family transcriptional regulator | |||
| 9580 | M | M.StyUK1V (100% identity) | GATC | M.SenRM096ORF9580P |
| 9585 | RusA family crossover junction | |||
| 9815 | phosphohydrolase | |||
| 9820 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenRM096DcmP |
| 9825 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM096DcmP |
| 9830 | drug/metabolite exporter YedA | |||
| 20365 | BREX system P-loop protein BrxC | |||
| 20370 | RM | SenRM085ORF20040P (100% identity) | GATCAG | SenRM096ORF20370P |
| 20375 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18015 | small effector SsaA | |||
| 18020 | R | StyUK1IP (99% identity) | CAGAG | SenRM096ORF18025P |
| 18025 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM096ORF18025P |
| 18030 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20200 | BrnT family toxin | |||
| 20205 | R | StyUK1MrrP (100% identity) | SenRM096MrrP | |
| 20210 | type I restriction-modification system | |||
| 20390 | protease Lon-related BREX system protein BrxL | |||
| 20395 | R | StyLTMrrP (100% identity) | SenRM096Mrr2P | |
| 20400 | AAA domain-containing protein | |||