Salmonella enterica subsp. enterica serovar Typhimurium RM085 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium RM085 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,851,366 bp
GenBank #: CP117404
REBASE acronym: SenRM085
Org_num: 65388
All begin PQQ07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19875 | restriction endonuclease | |||
| 19880 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenRM085ORF19885P |
| 19885 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenRM085ORF19885P |
| 19890 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenRM085ORF19885P |
| 19895 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM085ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 9490 | phosphohydrolase | |||
| 9495 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenRM085DcmP |
| 9500 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM085DcmP |
| 9505 | drug/metabolite exporter YedA | |||
| 20035 | BREX system P-loop protein BrxC | |||
| 20040 | RM | SenRM096ORF20370P (100% identity) | GATCAG | SenRM085ORF20040P |
| 20045 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17685 | small effector SsaA | |||
| 17690 | R | StyUK1IP (99% identity) | CAGAG | SenRM085ORF17695P |
| 17695 | M | M.StyUK1I (100% identity) | CAGAG | M.SenRM085ORF17695P |
| 17700 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19870 | BrnT family toxin | |||
| 19875 | R | StyUK1MrrP (100% identity) | SenRM085MrrP | |
| 19880 | type I restriction-modification system | |||
| 20060 | protease Lon-related BREX system protein BrxL | |||
| 20065 | R | StyLTMrrP (100% identity) | SenRM085Mrr2P | |
| 20070 | AAA domain-containing protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5645 | 3-5 exonuclease | |||
| 5650 | M | M.Sens24219ORF5575P (100% identity) | GATC | M.SenRM085ORF5650P |
| 5655 | replication endonuclease | |||