Salmonella enterica subsp. enterica serovar Newport RM089 |
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Putative Salmonella enterica subsp. enterica serovar Newport RM089 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,830,628 bp
GenBank #: CP117365
REBASE acronym: SenRM089
Org_num: 65376
All begin PQP78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19790 | 322 aa hypothetical protein | |||
| 19795 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenRM089ORF19800P |
| 19800 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenRM089ORF19800P |
| 19805 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.SenRM089ORF19800P |
| 19810 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.SenRM089DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM089ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 9085 | phosphohydrolase | |||
| 9090 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenRM089DcmP |
| 9095 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenRM089DcmP |
| 9100 | drug/metabolite exporter YedA | |||
| 13970 | methyltransferase | |||
| 13975 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenRM089ORF13975P |
| 13980 | 82 aa hypothetical protein | |||
| 19930 | YebC/PmpR family DNA-binding transcriptional | |||
| 19935 | R | SenS224ORF20045P (100% identity) | SenRM089ORF19935P | |
| 19940 | primase-like DNA-binding domain-containing | |||
| 22465 | replication endonuclease | |||
| 22470 | M | M1.SenS1655ORF23660P (100% identity) | M1.SenRM089ORF22470P | |
| 22475 | 66 aa hypothetical protein | |||
| 22480 | M | M.SenS1655ORF23670P (100% identity) | GATC | M2.SenRM089ORF22470P |
| 22485 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17575 | small effector SsaA | |||
| 17580 | R | Ssp6947IIP (100% identity) | CAGAG | SenRM089ORF17585P |
| 17585 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenRM089ORF17585P |
| 17590 | MFS transporter | |||