Salmonella enterica subsp. enterica serovar Newport RM038 |
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Putative Salmonella enterica subsp. enterica serovar Newport RM038 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,831,316 bp
GenBank #: CP117378
REBASE acronym: SenRM038
Org_num: 65373
All begin PQP81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20020 | 322 aa hypothetical protein | |||
| 20025 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenRM038ORF20030P |
| 20030 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenRM038ORF20030P |
| 20035 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.SenRM038ORF20030P |
| 20040 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM038ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 5520 | TraR/DksA family transcriptional regulator | |||
| 5525 | M | M.SenS224ORF5510P (100% identity) | GATC | M.SenRM038ORF5525P |
| 5530 | replication endonuclease | |||
| 9325 | phosphohydrolase | |||
| 9330 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenRM038DcmP |
| 9335 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenRM038DcmP |
| 9340 | drug/metabolite exporter YedA | |||
| 14205 | methyltransferase | |||
| 14210 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenRM038ORF14210P |
| 14215 | 82 aa hypothetical protein | |||
| 20160 | YebC/PmpR family DNA-binding transcriptional | |||
| 20165 | R | SenS224ORF20045P (100% identity) | SenRM038ORF20165P | |
| 20170 | primase-like DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17805 | small effector SsaA | |||
| 17810 | R | Ssp6947IIP (100% identity) | CAGAG | SenRM038ORF17815P |
| 17815 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenRM038ORF17815P |
| 17820 | MFS transporter | |||