Salmonella enterica subsp. enterica serovar Newport RM037 |
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Putative Salmonella enterica subsp. enterica serovar Newport RM037 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,837,969 bp
GenBank #: CP117380
REBASE acronym: SenRM037
Org_num: 65372
All begin PQP93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20075 | 322 aa hypothetical protein | |||
| 20080 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenRM037ORF20085P |
| 20085 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenRM037ORF20085P |
| 20090 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.SenRM037ORF20085P |
| 20095 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM037ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 5535 | TraR/DksA family transcriptional regulator | |||
| 5540 | M | M.SenS224ORF5510P (100% identity) | GATC | M.SenRM037ORF5540P |
| 5545 | replication endonuclease | |||
| 6565 | 82 aa hypothetical protein | |||
| 6570 | M | M.Sens29945ORF7970P (100% identity) | GATC | M.SenRM037ORF6570P |
| 6575 | methyltransferase | |||
| 11450 | drug/metabolite exporter YedA | |||
| 11455 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenRM037DcmP |
| 11460 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenRM037DcmP |
| 11465 | phosphohydrolase | |||
| 20215 | YebC/PmpR family DNA-binding transcriptional | |||
| 20220 | R | SenS224ORF20045P (100% identity) | SenRM037ORF20220P | |
| 20225 | primase-like DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17860 | small effector SsaA | |||
| 17865 | R | Ssp6947IIP (100% identity) | CAGAG | SenRM037ORF17870P |
| 17870 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenRM037ORF17870P |
| 17875 | MFS transporter | |||