|
Putative Salmonella enterica subsp. enterica serovar Uganda RM013 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,805,327 bp
GenBank #: CP117384
REBASE acronym: SenRM013
Org_num: 65394
All begin PQP89_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
2180 | DUF2556 family protein | |||
2185 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM013ORF2185P |
2190 | DNA-binding transcriptional regulator Fis | |||
6255 | 67 aa hypothetical protein | |||
6260 | M | M.SenRM018ORF6255P (100% identity) | M.SenRM013ORF6260P | |
6265 | DnaT-like ssDNA-binding domain-containing | |||
9170 | phosphohydrolase | |||
9175 | M | M.SenRM018DcmP (100% identity) | CCWGG | M.SenRM013DcmP |
9180 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM013DcmP |
9185 | drug/metabolite exporter YedA | |||
15000 | replication endonuclease | |||
15005 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.SenRM013ORF15005P |
15010 | TraR/DksA family transcriptional regulator | |||
20210 | integrase | |||
20215 | R | SenXORF20240P (100% identity) | SenRM013ORF20215P | |
20220 | adenosine deaminase | |||
20375 | DUF262 domain-containing protein | |||
20380 | RM | SenRM018ORF20380P (100% identity) | SenRM013ORF20380P | |
20385 | BREX-1 system phosphatase PglZ type A | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
17855 | small effector SsaA | |||
17860 | R | StyUK1IP (99% identity) | CAGAG | SenRM013ORF17865P |
17865 | M | M.SenRM018ORF17855P (100% identity) | CAGAG | M.SenRM013ORF17865P |
17870 | MFS transporter | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
6200 | tyrosine-type recombinase/integrase | |||
6205 | M | M.SenRM018ORF6200P (100% identity) | GATC | M.SenRM013ORF6205P |
6210 | DUF1317 family protein |