Salmonella enterica subsp. enterica serovar Uganda RM008 |
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Putative Salmonella enterica subsp. enterica serovar Uganda RM008 RM systems
Ref: Lewis,G.L. et al. unpublished
REBASE ref # 36283
Complete sequence: 4,765,591 bp
GenBank #: CP117390
REBASE acronym: SenRM008
Org_num: 65391
All begin PQP88_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | DUF2556 family protein | |||
| 2185 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenRM008ORF2185P |
| 2190 | DNA-binding transcriptional regulator Fis | |||
| 6260 | 67 aa hypothetical protein | |||
| 6265 | M | M.SenRM018ORF6255P (100% identity) | M.SenRM008ORF6265P | |
| 6270 | DnaT-like ssDNA-binding domain-containing | |||
| 9175 | phosphohydrolase | |||
| 9180 | M | M.SenRM018DcmP (100% identity) | CCWGG | M.SenRM008DcmP |
| 9185 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenRM008DcmP |
| 9190 | drug/metabolite exporter YedA | |||
| 15005 | replication endonuclease | |||
| 15010 | M | M.SenSP5ORF2922P (99% identity) | GATC | M.SenRM008ORF15010P |
| 15015 | TraR/DksA family transcriptional regulator | |||
| 19895 | integrase | |||
| 19900 | R | SenXORF20240P (100% identity) | SenRM008ORF19900P | |
| 19905 | adenosine deaminase | |||
| 20065 | DUF262 domain-containing protein | |||
| 20070 | RM | SenRM018ORF20380P (100% identity) | SenRM008ORF20070P | |
| 20075 | BREX-1 system phosphatase PglZ type A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17540 | small effector SsaA | |||
| 17545 | R | StyUK1IP (99% identity) | CAGAG | SenRM008ORF17550P |
| 17550 | M | M.SenRM018ORF17855P (100% identity) | CAGAG | M.SenRM008ORF17550P |
| 17555 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6205 | tyrosine-type recombinase/integrase | |||
| 6210 | M | M.SenRM018ORF6200P (100% identity) | GATC | M.SenRM008ORF6210P |
| 6215 | DUF1317 family protein | |||