Clostridium perfringens QHY-2 |
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Putative Clostridium perfringens QHY-2 RM systems
Ref: Wu,K. unpublished
REBASE ref # 28162
| Sequence length: | GenBank #: | |
| Chromosome: | 3,361,707 bp | CP118265 |
| plasmid pQHY-2: | 166,452 bp | CP118266 |
REBASE acronym: CpeQHY2
Org_num: 65229
All begin PVA22_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 865 | winged helix-turn-helix transcriptional | |||
| 870 | M | M.Asp20126ORF5600P (48% identity) | M.CpeQHY2ORF870P | |
| 875 | S | S.Sse23556ORF20325P (57% identity) | S.CpeQHY2ORF870P | |
| 880 | 251 aa hypothetical protein | |||
| 2075 | BREX system P-loop protein BrxC | |||
| 2080 | RM | Cpe2837III (100% identity) | GRNACAYT | CpeQHY2ORF2080P |
| 2085 | DUF234 domain-containing protein | |||
| 8040 | 60 aa hypothetical protein | |||
| 8045 | M | M.Cpe10240ORF877P (99% identity) | M.CpeQHY2ORF8045P | |
| 8050 | 294 aa hypothetical protein | |||
| 14990 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14995 | M | M.CpeNE18ORF15180P (100% identity) | GTATAC | M.CpeQHY2ORF14995P |
| 15000 | YhgE/Pip domain-containing protein | |||
| plasmid pQHY-2 | ||||
| 15515 | helix-turn-helix domain-containing protein | |||
| 15520 | M | M.Cpe53kr1ORF15000P (100% identity) | M.CpeQHY2ORF15520P | |
| 15525 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4900 | 103 aa hypothetical protein | |||
| 4905 | R | Cpe80McrBP (98% identity) | CpeQHY2McrBP | |
| 4910 | R | CpeAMcrCP (97% identity) | CpeQHY2McrCP | |
| 4915 | SdpI family protein | |||
| 5035 | 355 aa hypothetical protein | |||
| 5040 | R | Cpe932ORF11240P (98% identity) | CpeQHY2ORF5040P | |
| 5045 | 66 aa hypothetical protein | |||