Vibrio aestuarianus 08_114_4T3 |
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Putative Vibrio aestuarianus 08_114_4T3 RM systems
Ref: Mesnil,A. and Travers,M.-A. unpublished
REBASE ref # 36336
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,114,530 bp | CP091995 |
| chromosome 2: | 1,142,475 bp | CP091996 |
REBASE acronym: Vae4T3
Org_num: 65535
All begin MCL31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7235 | TnsD family transposase | |||
| 7240 | M | M.Vae7MT1ORF7410P (100% identity) | TAACNNNNRTAC | M.Vae4T3ORF7240P |
| 7245 | S | S.Vae7MT1ORF7410P (100% identity) | TAACNNNNRTAC | S.Vae4T3ORF7240P |
| 7250 | ATP-binding protein | |||
| 7255 | 288 aa hypothetical protein | |||
| 7260 | R | Vae7MT1ORF7410P (100% identity) | TAACNNNNRTAC | Vae4T3ORF7240P |
| 7265 | 218 aa hypothetical protein | |||
| 12175 | GIY-YIG nuclease family protein | |||
| 12180 | M | M.Vae7MT1ORF12315P (100% identity) | M.Vae4T3ORF12180P | |
| 12185 | S | S.Vae7MT1ORF12315P (100% identity) | S.Vae4T3ORF12180P | |
| 12190 | site-specific integrase | |||
| chromosome 2 | ||||
| 19620 | ATP-binding protein | |||
| 19625 | R | Vae7MT1ORF15425P (100% identity) | Vae4T3ORF19635P | |
| 19630 | S | S.Vae7MT1ORF15425P (100% identity) | S.Vae4T3ORF19635P | |
| 19635 | M | M.Vae7MT1ORF15425P (100% identity) | M.Vae4T3ORF19635P | |
| 19640 | DUF2913 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7630 | helix-turn-helix domain-containing protein | |||
| 7635 | M | M.Vae7MT1ORF7805P (100% identity) | M.Vae4T3ORF7635P | |
| 7640 | DUF3578 domain-containing protein | |||
| 8550 | SPOR domain-containing protein | |||
| 8555 | M | M.VaeU29DamP (100% identity) | GATC | M.Vae4T3DamP |
| 8560 | ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 19650 | 107 aa hypothetical protein | |||
| 19655 | M | M.Vae7MT1ORF15405P (100% identity) | M.Vae4T3ORF19655P | |
| 19660 | 118 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3275 | methyltransferase domain-containing protein | |||
| 3280 | R | Vae7MT1ORF3355P (100% identity) | Vae4T3ORF3280P | |
| 3285 | AbrB family transcriptional regulator | |||