Xanthomonas campestris pv. campestris 08284 |
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Putative Xanthomonas campestris pv. campestris 08284 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 5,012,081 bp
GenBank #: CP066945
REBASE acronym: Xca8284
Org_num: 65572
All begin JH306_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6290 | 163 aa hypothetical protein | |||
| ??? | S | S3.Xca8305ORF6290P (94% identity) | S3.Xca8284ORF6340P | |
| 6300 | 76 aa hypothetical protein | |||
| 6305 | exo-alpha-sialidase | |||
| 6310 | RebB family R body protein | |||
| 6315 | 71 aa hypothetical protein | |||
| 6320 | M48 family metallopeptidase | |||
| 6325 | R | XcaCN13ORFCP (95% identity) | Xca8284ORF6340P | |
| 6330 | S | S.Xcacc2ORF6130P (100% identity) | CAAGNNNNNCTTA | S1.Xca8284ORF6340P |
| 6335 | damage-inducible protein D | |||
| 6340 | M | M.Xcacc2ORF6130P (99% identity) | M.Xca8284ORF6340P | |
| 6345 | restriction endonuclease subunit S | |||
| 6350 | 86 aa hypothetical protein | |||
| 6355 | type III secretion system effector protein XopK | |||
| ??? | S | S2.Xca108GORF15645P (79% identity) | S2.Xca8284ORF6340P | |
| 6370 | 173 aa hypothetical protein | |||
| 15685 | 98 aa hypothetical protein | |||
| 15690 | R | Xca5817ORFDP (89% identity) | Xca8284ORF15705P | |
| 15695 | S | S.XcaTJORFEP (74% identity) | S.Xca8284ORF15705P | |
| 15700 | virulence RhuM family protein | |||
| 15705 | M | M.Xca3077ORF7585P (99% identity) | M.Xca8284ORF15705P | |
| 15710 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3030 | IS3-like element IS1404 family transposase | |||
| 3035 | R | XcaYORFAP (98% identity) | Xca8284ORF3035P | |
| 3040 | 90 aa hypothetical protein | |||
| 5265 | 860 aa hypothetical protein | |||
| 5270 | M | M.Xca474ORF5255P (100% identity) | M.Xca8284ORF5270P | |
| 5275 | AIPR family protein | |||
| 5280 | PD-(D/E)XK motif protein | |||
| 5285 | Z1 domain-containing protein | |||
| 5290 | ATP-binding protein | |||
| 5295 | V | V.Xca662ORF16645P (100% identity) | V.Xca8284ORF5270P | |
| 5300 | HNH endonuclease | |||
| 10045 | glutamine-hydrolyzing GMP synthase | |||
| 10050 | RM | Xca331ORF10155P (99% identity) | Xca8284ORF10050P | |
| 10055 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7225 | 71 aa hypothetical protein | |||
| 7230 | R | Xcacc2McrBP (100% identity) | Xca8284McrBP | |
| 7235 | R | XcaCN13aMcrCP (100% identity) | Xca8284McrCP | |
| 7240 | sensor histidine kinase | |||
| 15705 | SAM-dependent DNA methyltransferase | |||
| 15710 | R | Xcacc2MrrP (100% identity) | Xca8284MrrP | |
| 15715 | type II toxin-antitoxin system RelE/ParE family | |||