Xanthomonas campestris pv. campestris 42-1 |
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Putative Xanthomonas campestris pv. campestris 42-1 RM systems
Ref: Dubrow,Z.E. et al. Mol Plant Microbe Interact 35 (9), 791-802 (2022)
REBASE ref # 36208
Complete sequence: 4,982,561 bp
GenBank #: CP066990
REBASE acronym: Xca421
Org_num: 65598
All begin JH289_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6185 | type II toxin-antitoxin system RelE/ParE family | |||
| 6190 | R | Xca8497ORF16720P (100% identity) | Xca421ORF6205P | |
| 6195 | S | S.Xca8497ORF16720P (100% identity) | S.Xca421ORF6205P | |
| 6200 | AAA family ATPase | |||
| 6205 | M | M.Xca8497ORF16720P (100% identity) | M.Xca421ORF6205P | |
| 6210 | 98 aa hypothetical protein | |||
| 15690 | restriction endonuclease subunit S | |||
| 15695 | M | M.Xcacc2ORF6130P (100% identity) | M.Xca421ORF15695P | |
| 15700 | damage-inducible protein D | |||
| 15705 | virulence RhuM family protein | |||
| 15710 | S | S.Xca424ORF6005P (100% identity) | S.Xca421ORF15695P | |
| 15715 | R | Xca424ORF6005P (100% identity) | Xca421ORF15695P | |
| 15720 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11325 | DNA topoisomerase III | |||
| 11330 | M | M.XcaYORFEP (48% identity) | M.Xca421ORF11330P | |
| 11335 | AAA family ATPase | |||
| 11975 | IS3-like element IS476 family transposase | |||
| 11980 | M | M.Xca424ORF9745P (100% identity) | M.Xca421ORF11980P | |
| 11985 | glutamine-hydrolyzing GMP synthase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3110 | DNA binding domain-containing protein | |||
| 3115 | M | M.Xca424ORF18625P (100% identity) | M.Xca421ORF3115P | |
| 3120 | R | Xca424ORF18625P (100% identity) | Xca421ORF3115P | |
| 3125 | IS3-like element IS476 family transposase | |||