Pseudomonas chlororaphis ATCC 17811 |
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Putative Pseudomonas chlororaphis ATCC 17811 RM systems
Ref: Wheeldon,I. et al. unpublished
REBASE ref # 36275
Complete sequence: 7,189,114 bp
GenBank #: CP118153
REBASE acronym: Pch17811
Org_num: 65326
All begin PUP50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14490 | restriction endonuclease | |||
| 14495 | R | Ach8003IIP (89% identity) | Pch17811ORF14510P | |
| 14500 | anticodon nuclease | |||
| 14505 | S | S.Mme26612ORF5695P (49% identity) | S.Pch17811ORF14510P | |
| 14510 | M | M.Bgl25417ORF4283P (90% identity) | M.Pch17811ORF14510P | |
| 14515 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5190 | DUF6124 family protein | |||
| 5195 | V | V.PaePS50ORF4579P (79% identity) | V.Pch17811ORF5205P | |
| 5200 | restriction endonuclease | |||
| 5205 | M | M.PaeXMGORFDP (94% identity) | M.Pch17811ORF5205P | |
| 5210 | ATP-binding protein | |||
| 5195 | very short patch repair endonuclease | |||
| 5200 | R | PaePS50ORF4580P (89% identity) | Pch17811ORF5200P | |
| 5205 | DNA cytosine methyltransferase | |||
| 12180 | 76 aa hypothetical protein | |||
| 12185 | M | M.Pch295782ORF465P (97% identity) | M.Pch17811ORF12185P | |
| 12190 | RNA-directed DNA polymerase | |||
| 25755 | ATP-binding protein | |||
| 25760 | M | M.Pfr402ORF22325P (95% identity) | M.Pch17811ORF25760P | |
| 25765 | 187 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5245 | SNF2-related protein | |||
| 5250 | M | M.Dsp3051ORF1320P (61% identity) | M.Pch17811ORF5250P | |
| 5255 | R | PspAO1ORF26265P (95% identity) | Pch17811ORF5250P | |
| 5260 | transposase domain-containing protein | |||