Escherichia coli APEC 102026 |
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Putative Escherichia coli APEC 102026 RM systems
Ref: Saliha,U. et al. unpublished
REBASE ref # 36244
Complete sequence: 5,197,709 bp
GenBank #: CP087290
REBASE acronym: Eco102026
Org_num: 65253
All begin LO741_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6395 | AAA family ATPase | |||
| 6400 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco102026ORF6405P |
| 6405 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco102026ORF6405P |
| 6410 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco102026ORF6405P |
| 6415 | transposase | |||
| 14980 | endoribonuclease SymE | |||
| 14985 | R | Ecos641ORF3050P (100% identity) | Eco102026ORF15000P | |
| 14990 | S | S.Ecos641ORF3050P (89% identity) | S.Eco102026ORF15000P | |
| 14995 | IS5 family transposase | |||
| 15000 | M | M.Ecos641ORF3050P (100% identity) | M.Eco102026ORF15000P | |
| 15005 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8485 | DNA-binding transcriptional regulator Fis | |||
| 8490 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco102026ORF8490P |
| 8495 | DUF2556 family protein | |||
| 9090 | ribulose-phosphate 3-epimerase | |||
| 9095 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco102026DamP |
| 9100 | cell division protein DamX | |||
| 13065 | PerC family transcriptional regulator | |||
| 13070 | M | M.EcoT761ORF20590P (100% identity) | GATC | M.Eco102026ORF13070P |
| 13075 | LexA family transcriptional regulator | |||
| 13105 | 67 aa hypothetical protein | |||
| 13110 | M | M.Sso63633ORF22290P (100% identity) | M.Eco102026ORF13110P | |
| 13115 | phage lysis protein EssD | |||
| 13940 | superoxide dismutase family protein | |||
| 13945 | R | SenS530DptFP (100% identity) | Eco102026DptFP | |
| 13950 | DNA phosphorothioation-dependent restriction | |||
| 13945 | DNA phosphorothioation-dependent restriction | |||
| 13950 | R | SenI222DptGP (100% identity) | Eco102026DptGP | |
| 13955 | DNA phosphorothioation-dependent restriction | |||
| 13950 | DNA phosphorothioation-dependent restriction | |||
| 13955 | R | SenS530DptHP (100% identity) | Eco102026DptHP | |
| 13960 | DUF262 domain-containing protein | |||
| 13970 | 255 aa hypothetical protein | |||
| 13975 | M | M.SenS530DndEP (100% identity) | M.Eco102026DndEP | |
| 13980 | DNA sulfur modification protein DndD | |||
| 13975 | DNA sulfur modification protein DndE | |||
| 13980 | M | M.SenS530DndDP (100% identity) | M.Eco102026DndDP | |
| 13985 | DNA phosphorothioation system sulfurtransferase | |||
| 13980 | DNA sulfur modification protein DndD | |||
| 13985 | M | M.SenS530DndCP (100% identity) | M.Eco102026DndCP | |
| 13990 | DNA sulfur modification protein DndB | |||
| 13985 | DNA phosphorothioation system sulfurtransferase | |||
| 13990 | M | M.SenS530DndBP (100% identity) | M.Eco102026DndBP | |
| 13995 | DNA-binding protein | |||
| 14795 | peptidase | |||
| 14800 | R | Ecos641ORF2855P (100% identity) | Eco102026ORF14800P | |
| 14805 | HNH endonuclease | |||
| 19565 | recombination protein NinB | |||
| ??? | M | M.EcoE7ORF7280P (100% identity) | GATC | M.Eco102026ORF19570P |
| 19580 | DUF2591 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15000 | type I restriction-modification system subunit | |||
| 15005 | R | EfeE4C07MrrP (100% identity) | Eco102026MrrP | |
| 15010 | BrnT family toxin | |||