Vibrio campbellii 20220413_1 |
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Putative Vibrio campbellii 20220413_1 RM systems
Ref: Huang,T. and Zhang,B. unpublished
REBASE ref # 36207
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,659,034 bp | CP117988 |
| plasmid p_1: | 110,181 bp | CP117990 |
REBASE acronym: Vca4131
Org_num: 65181
All begin PUN50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p_1 | ||||
| 26770 | DUF4433 domain-containing protein | |||
| 26775 | R | VtuFP17ORF1370P (98% identity) | Vca4131ORF26785P | |
| 26780 | S | S.Psp125ORF2319P (53% identity) | S.Vca4131ORF26785P | |
| 26785 | M | M.VvuPer2ORF7600P (97% identity) | M.Vca4131ORF26785P | |
| 26790 | DUF723 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1600 | AAA family ATPase | |||
| 1605 | M | M.VspG11DamP (100% identity) | GATC | M.Vca4131DamP |
| 1610 | ribulose-phosphate 3-epimerase | |||
| 5365 | tyrosine-type recombinase/integrase | |||
| 5370 | M | M.Vhaf6ORFEP (99% identity) | M.Vca4131ORF5370P | |
| 5375 | sensor histidine kinase | |||
| 11155 | aldehyde-activating protein | |||
| 11160 | R | Vca502ORF5885P (95% identity) | Vca4131ORF11160P | |
| 11165 | sphingomyelin phosphodiesterase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3385 | DUF4391 domain-containing protein | |||
| 3390 | M | M.PmiCRPM10ORF1835P (97% identity) | M.Vca4131ORF3390P | |
| 3395 | R | Pst41ORF18235P (97% identity) | Vca4131ORF3390P | |
| 3400 | 281 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5380 | response regulator receiver domain | |||
| 5385 | R | VhaNHLM1ORF8175P (84% identity) | Vca4131ORF5385P | |
| 5390 | helix-turn-helix domain-containing protein | |||