Salmonella enterica subsp. enterica serovar London L1 |
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Putative Salmonella enterica subsp. enterica serovar London L1 RM systems
Ref: Wen,H. unpublished
REBASE ref # 36179
| Sequence length: | GenBank #: | |
| Chromosome: | 4,684,039 bp | CP117698 |
| plasmid unnamed1: | 102,202 bp | CP117699 |
REBASE acronym: SenLL1
Org_num: 65084
All begin PRJ38_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | M.StyTDamP (100% identity) | GATC | M.SenLL1DamP |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2330 | DUF2556 family protein | |||
| 2335 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.SenLL1ORF2335P |
| 2340 | DNA-binding transcriptional regulator Fis | |||
| 8745 | phosphohydrolase | |||
| 8750 | M | M.SenSP5DcmP (100% identity) | CCWGG | M.SenLL1DcmP |
| 8755 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenLL1DcmP |
| 8760 | drug/metabolite exporter YedA | |||
| 14510 | replication endonuclease | |||
| 14515 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.SenLL1ORF14515P |
| 14520 | TraR/DksA family transcriptional regulator | |||
| 19415 | YebC/PmpR family DNA-binding transcriptional | |||
| 19420 | R | SenZYXORFBP (100% identity) | SenLL1ORF19420P | |
| 19425 | primase-like DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17060 | small effector SsaA | |||
| 17065 | R | Ssp6947IIP (100% identity) | CAGAG | SenLL1ORF17070P |
| 17070 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.SenLL1ORF17070P |
| 17075 | MFS transporter | |||
| plasmid unnamed1 | ||||
| 22755 | IS3-like element ISSen4 family transposase | |||
| 22760 | R | SenSP5ORF35P (100% identity) | SenLL1ORF22765P | |
| 22765 | M | M.SenSP5ORF35P (100% identity) | M.SenLL1ORF22765P | |
| 22770 | 69 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19275 | BrnT family toxin | |||
| 19280 | R | StyTMrrP (100% identity) | SenLL1MrrP | |
| 19285 | type I restriction-modification system | |||