Salmonella enterica subsp. enterica serovar London F1 |
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Putative Salmonella enterica subsp. enterica serovar London F1 RM systems
Ref: Wen,H. and Zhao,J. unpublished
REBASE ref # 36178
Complete sequence: 4,793,690 bp
GenBank #: CP117696
REBASE acronym: SenF1
Org_num: 65083
All begin PTQ22_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1850 | cell division protein DamX | |||
| 1855 | M | M.StyTDamP (100% identity) | GATC | M.SenF1DamP |
| 1860 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 family protein | |||
| 2345 | M | M.SenTC177ORF2255P (100% identity) | ATGCAT | M.SenF1ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 8750 | phosphohydrolase | |||
| 8755 | M | M.SenSP5DcmP (100% identity) | CCWGG | M.SenF1DcmP |
| 8760 | V | V.StyTDcmP (100% identity) | CCWGG | V.SenF1DcmP |
| 8765 | drug/metabolite exporter YedA | |||
| 14510 | replication endonuclease | |||
| 14515 | M | M.SenSP5ORF2922P (100% identity) | GATC | M.SenF1ORF14515P |
| 14520 | TraR/DksA family transcriptional regulator | |||
| 19415 | YebC/PmpR family DNA-binding transcriptional | |||
| 19420 | R | SenZYXORFBP (100% identity) | SenF1ORF19420P | |
| 19425 | primase-like DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17060 | small effector SsaA | |||
| 17065 | R | Ssp6947IIP (100% identity) | CAGAG | SenF1ORF17070P |
| 17070 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.SenF1ORF17070P |
| 17075 | MFS transporter | |||
| 21300 | 69 aa hypothetical protein | |||
| 21305 | M | M.SenSP5ORF35P (100% identity) | M.SenF1ORF21305P | |
| 21310 | R | SenSP5ORF35P (100% identity) | SenF1ORF21305P | |
| 21315 | IS3-like element ISSen4 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19275 | BrnT family toxin | |||
| 19280 | R | StyTMrrP (100% identity) | SenF1MrrP | |
| 19285 | type I restriction-modification system | |||